RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Rbck1Q9WUB0 508 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Cdc42ep5Q9Z0X0 150 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Arhgef37A1IGU4 676 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Nhsl2B1AXH1 854 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Gm5930D3Z257 264 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Rad51ap2G3UW63 976 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 ChgbP16014 677 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 PenkP22005 268 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Crabp2P22935 138 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Asgr1P34927 284 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Fbp2P70695 339 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Krt26Q3TRJ4 462 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Ubtfl1Q3USZ2 394 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Grm5Q3UVX5 1203 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Olfr464Q5SW48 313 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Serpina3fQ80X76 445 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Pdk1Q8BFP9 434 aaKnown RBP10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Zfp398Q8BV16 643 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Sept10Q8C650 452 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Snx9Q91VH2 595 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 B4galt3Q91YY2 395 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Rec114Q9CWH4 259 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Thg1lQ9CY52 298 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Tpd52l2Q9CYZ2 220 aaKnown RBP10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Zcchc12Q9CZA5 402 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Slamf8Q9D3G2 278 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Adad2Q9D5P4 478 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Eef1akmt2Q9D853 244 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Yipf5Q9EQQ2 257 aa10.83□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Lcn6A2AJB9 181 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 2310061I04RikB8JJ69 315 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Gm10479K7N6H4 105 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Pold2O35654 469 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 NoctO35710 429 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Pknox1O70477 436 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 PdgfrbP05622 1098 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 FynP39688 537 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 ArsbP50429 534 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Krt6aP50446 553 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Ccna2P51943 422 aaKnown RBP10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Nudt1P53368 156 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Abce1P61222 599 aaKnown RBP10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Naa20P61600 178 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Adcy6Q01341 1165 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Cd36Q08857 472 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Grid2ipQ0QWG9 1203 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Gpr15Q0VDU3 360 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Hddc2Q3SXD3 199 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Patl1Q3TC46 770 aaKnown RBP10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Zfp607aQ3TQG9 686 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Zbtb8osQ505B7 168 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Zfp658Q5PPQ4 887 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 CapslQ6P8Y1 208 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Reps2Q80XA6 521 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Pcdhb7Q8CDY9 829 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Ttc39cQ8VE09 580 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Pcdhb13Q91Y06 796 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Trem2Q99NH8 227 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Trim12aQ99PQ1 284 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Apbb2Q9DBR4 760 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Gfra4Q9JJT2 260 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Smok3cA0A087WSF2 504 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Dennd5bA2RSQ0 1274 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Phf11A6H5X4 337 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Rc3h2P0C090 1187 aaKnown RBP10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Il6raP22272 460 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Acot8P58137 320 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Morf4l1P60762 362 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 AurkaP97477 395 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 SelpQ01102 768 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Trnau1apQ80VC6 287 aaKnown RBP10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Rnf38Q8BI21 518 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Sh3kbp1Q8R550 709 aaKnown RBP10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Rprd1aQ8VDS4 312 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 HnrnprQ8VHM5 632 aaKnown RBP10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 BsndQ8VIM4 307 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Lrrc17Q9CXD9 443 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Kdm8Q9CXT6 414 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Tubb3Q9ERD7 450 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Timp4Q9JHB3 224 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Wnt8bQ9WUD6 350 aa10.82□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Dnah12Q3V0Q1 3086 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Spata31E9QAF0 1014 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Gm6614M0QWR8 670 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Ebf3O08791 596 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Sult3a1O35403 293 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Cldn5O54942 218 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Prl3b1P09586 222 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 ItgavP43406 1044 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Slc12a1P55014 1095 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Ythdf1P59326 559 aaKnown RBP10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Plcl1Q3USB7 1096 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Tmem237Q3V0J1 427 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Xkr4Q5GH67 647 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Msi1Q61474 362 aaKnown RBP10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Has1Q61647 583 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Wee2Q66JT0 555 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Rxfp1Q6R6I7 758 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Slc16a9Q7TM99 508 aa10.81□□□□□ -0.68
Ptcd1-201ENSMUST00000031628 Tbx10Q810F8 385 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms