RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Map3k21Q8VDG6 1002 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 DgkgQ91WG7 788 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Actr3Q99JY9 418 aaKnown RBP16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Slc26a5Q99NH7 744 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Ilf2Q9CXY6 390 aaKnown RBP16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 M1apQ9Z0E1 529 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 2210011C24RikA0A087WQ89 206 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 S100a2J3QMC7 104 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 AgxtO35423 414 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Itgb5O70309 798 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Fdft1P53798 416 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 CttnQ60598 546 aaKnown RBP16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Tspan18Q80WR1 248 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Q8BH50 245 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Ubqln1Q8R317 582 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Pole4Q9CQ36 118 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Arl6O88848 186 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Sult1e1P49891 295 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Rbp1Q00915 135 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Alkbh5Q3TSG4 395 aaKnown RBP16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Pi4kbQ8BKC8 816 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Pcdhb11Q91UZ8 797 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Ubxn6Q99PL6 442 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Tnfaip8l2Q9D8Y7 184 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Epm2aQ9WUA5 330 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Ddi2A2ADY9 399 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Siah3B2RWG3 268 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Speer4eK7N6S8 255 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mknk1O08605 427 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 CcnkO88874 554 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Far2Q7TNT2 515 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Pum1Q80U78 1189 aaKnown RBP16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Spata20Q80YT5 790 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Q810N5 247 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 B3glctQ8BHT6 489 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Ccdc17Q8CE13 565 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Ptk2bQ9QVP9 1009 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Lrrc73B2RWC4 316 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Cd36Q08857 472 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 R3hdm4Q4VBF2 262 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mapkap1Q8BKH7 522 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Slc39a13Q8BZH0 361 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Dmtf1Q8CE22 761 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 D630039A03RikQ8K0M7 236 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Exosc4Q921I9 245 aaKnown RBP16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 XkQ9QXY7 446 aa16.91■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Lcn5A2AJB7 192 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 CrymO54983 313 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Vcam1P29533 739 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 HpseQ6YGZ1 535 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Klhl36Q8R124 613 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Prmt7Q922X9 692 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Usp26Q99MX1 835 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Rnft1Q9DCN7 395 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Mtx3D3YTP3 312 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Vmn2r74E9PW21 853 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Ppm1aP49443 382 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Polr1cP52432 346 aaKnown RBP16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 CtskP55097 329 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Dsc2P55292 902 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Ntrk1Q3UFB7 799 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Otol1Q4ZJM7 482 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Cyp4b1Q64462 511 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Hdac7Q8C2B3 938 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Lamtor4Q8CF66 99 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Acsm2Q8K0L3 575 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Acad10Q8K370 1069 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Snrpb2Q9CQI7 225 aaKnown RBP16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Eef1akmt2Q9D853 244 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Pnp2Q9D8C9 305 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Sult6b2B7ZWN4 290 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Hnrnph3D3Z3N4 346 aaKnown RBP16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Gm21833J3QPK1 500 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Gm10338K7N692 204 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 ChgbP16014 677 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Olfr449Q8VGW8 311 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Sh3d19Q91X43 789 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Ak5Q920P5 562 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Rgs18Q99PG4 235 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Gna12P27600 379 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Efr3bQ6ZQ18 817 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Olfr293Q7TS10 336 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 RhouQ9EQT3 261 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Tbx20Q9ES03 445 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Sfmbt1Q9JMD1 863 aa16.9■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Cd44P15379 778 aa16.89■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Oog3Q3UWY1 500 aa16.89■□□□□ 0.3
Col17a1-201ENSMUST00000026045 MogsQ80UM7 834 aaKnown RBP16.89■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Amigo1Q80ZD8 492 aa16.89■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Baiap2Q8BKX1 535 aa16.89■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Gtf3c4Q8BMQ2 817 aaKnown RBP16.89■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Wdr98Q8VC42 657 aa16.89■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Q99KU6 348 aa16.89■□□□□ 0.3
Col17a1-201ENSMUST00000026045 Spata6lB2RV46 347 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Hoxa11P31311 313 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Afg1lQ3V384 480 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Bcar1Q61140 874 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Lsm8Q6ZWM4 96 aaKnown RBP16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 Dennd1aQ8K382 1016 aa16.89■□□□□ 0.29
Col17a1-201ENSMUST00000026045 HyiQ8R1F5 277 aa16.89■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms