RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 DQX1Q8TE96 717 aaKnown RBP17.1■□□□□ 0.33
PHGDH-223ENST00000641597 AGO3Q9H9G7 860 aaKnown RBP17.1■□□□□ 0.33
PHGDH-223ENST00000641597 TCF7L2Q9NQB0 619 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 MPP6Q9NZW5 540 aa17.1■□□□□ 0.33
PHGDH-223ENST00000641597 RUVBL2Q9Y230 463 aaKnown RBP17.1■□□□□ 0.33
PHGDH-223ENST00000641597 C9IYK1 514 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 CCL22O00626 93 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 MOCS2O96007 188 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-223ENST00000641597 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-223ENST00000641597 RAG1P15918 1043 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 SERPINB6P35237 376 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 CXCR3P49682 368 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 NUDT2P50583 147 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 PKNOX1P55347 436 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 GJA9P57773 515 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 AGMOQ6ZNB7 445 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 DHDDSQ86SQ9 333 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 FSTL5Q8N475 847 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-223ENST00000641597 USP13Q92995 863 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-223ENST00000641597 CATSPER2Q96P56 530 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 BRD8Q9H0E9 1235 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 NEU3Q9UQ49 428 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 CCNT2O60583 730 aaKnown RBP17.09■□□□□ 0.33
PHGDH-223ENST00000641597 THP07101 528 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 CDC42EP1Q00587 391 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 MSLNQ13421 630 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-223ENST00000641597 ZNF789Q5FWF6 425 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 TMCO4Q5TGY1 634 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 IL31Q6EBC2 164 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 CCNYL1Q8N7R7 359 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 OR10T2Q8NGX3 314 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 ACTRT2Q8TDY3 377 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 NXNL1Q96CM4 212 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 FICDQ9BVA6 458 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 XPR1Q9UBH6 696 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 SCOCQ9UIL1 159 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 SORCS3Q9UPU3 1222 aa17.09■□□□□ 0.33
PHGDH-223ENST00000641597 GRID2O43424 1007 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 B3GAT3O94766 335 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 LYNP07948 512 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 OR4Q2P0C623 313 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 GRIK3Q13003 919 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 CNGA3Q16281 694 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 PCSK7Q16549 785 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 ARL13BQ3SXY8 428 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 CXCL17Q6UXB2 119 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 PDZD4Q76G19 769 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-223ENST00000641597 ANKRD23Q86SG2 305 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 LSMEM2Q8N112 164 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 GTF3C2Q8WUA4 911 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-223ENST00000641597 NDNQ99608 321 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 EPAS1Q99814 870 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 DNAI2Q9GZS0 605 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 INPP5FQ9Y2H2 1132 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 CDY1Q9Y6F8 540 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 TLL2Q9Y6L7 1015 aa17.08■□□□□ 0.33
PHGDH-223ENST00000641597 CFLARO15519 480 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 DLX3O60479 287 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 SMIM24O75264 130 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 DBN1Q16643 649 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 TSTD2Q5T7W7 516 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 SDHAF4Q5VUM1 108 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 NXNQ6DKJ4 435 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 ARHGAP12Q8IWW6 846 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 FAM156AQ8NDB6 213 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-223ENST00000641597 CMTM5Q96DZ9 223 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 IFT43Q96FT9 208 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 SIKE1Q9BRV8 207 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 SYT17Q9BSW7 474 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 IL22Q9GZX6 179 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 ADAM28Q9UKQ2 775 aa17.08■□□□□ 0.32
PHGDH-223ENST00000641597 H3BNX3 289 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 MATN2O00339 956 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 FBXO21O94952 628 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 CHRNA1P02708 482 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 TFEBP19484 476 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 GLDCP23378 1020 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 PIK3R1P27986 724 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 CACNB2Q08289 660 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-223ENST00000641597 CDH17Q12864 832 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 FSCN1Q16658 493 aaKnown RBP17.07■□□□□ 0.32
PHGDH-223ENST00000641597 DENND5AQ6IQ26 1287 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 TMC7Q7Z402 723 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 SMARCD1Q96GM5 515 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 GPR22Q99680 433 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 SLC39A8Q9C0K1 460 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 TNFRSF12AQ9NP84 129 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 TLK1Q9UKI8 766 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 MPOP05164 745 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 HNRNPLP14866 589 aaKnown RBP eCLIP17.07■□□□□ 0.32
PHGDH-223ENST00000641597 CRABP2P29373 138 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 DPP6P42658 865 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 PURAQ00577 322 aaKnown RBP17.07■□□□□ 0.32
PHGDH-223ENST00000641597 LBRQ14739 615 aaKnown RBP17.07■□□□□ 0.32
PHGDH-223ENST00000641597 ANO4Q32M45 955 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 FBXW8Q8N3Y1 598 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms