RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 GSPT2Q8IYD1 628 aaKnown RBP20.2■□□□□ 0.82
PHGDH-210ENST00000641115 AHI1Q8N157 1196 aa20.2■□□□□ 0.82
PHGDH-210ENST00000641115 TEX26Q8N6G2 289 aa20.2■□□□□ 0.82
PHGDH-210ENST00000641115 CNTD1Q8N815 330 aa20.2■□□□□ 0.82
PHGDH-210ENST00000641115 FBXO25Q8TCJ0 367 aa20.2■□□□□ 0.82
PHGDH-210ENST00000641115 CPT1BQ92523 772 aa20.2■□□□□ 0.82
PHGDH-210ENST00000641115 LMLNQ96KR4 655 aa20.2■□□□□ 0.82
PHGDH-210ENST00000641115 RPP25Q9BUL9 199 aaKnown RBP20.2■□□□□ 0.82
PHGDH-210ENST00000641115 ETNK1Q9HBU6 452 aa20.2■□□□□ 0.82
PHGDH-210ENST00000641115 MTRF1LQ9UGC7 380 aaKnown RBP20.2■□□□□ 0.82
PHGDH-210ENST00000641115 SHOC2Q9UQ13 582 aa20.2■□□□□ 0.82
PHGDH-210ENST00000641115 MIA3Q5JRA6 1907 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 CCDC151A5D8V7 595 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 SMAPO00193 183 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 NFKB1P19838 968 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 SMAD2Q15796 467 aaKnown RBP20.19■□□□□ 0.82
PHGDH-210ENST00000641115 FUT11Q495W5 492 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 ASTLQ6HA08 431 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-210ENST00000641115 HIBCHQ6NVY1 386 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-210ENST00000641115 ZDHHC24Q6UX98 284 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 HOOK3Q86VS8 718 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.19■□□□□ 0.82
PHGDH-210ENST00000641115 EXOC4Q96A65 974 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 PPP1R2P1Q96PQ5 205 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 CINPQ9BW66 212 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-210ENST00000641115 BRD9Q9H8M2 597 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 NT5MQ9NPB1 228 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 ZDHHC18Q9NUE0 388 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 SEPT3Q9UH03 358 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 FBXO10Q9UK96 956 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 INTS6Q9UL03 887 aaKnown RBP20.19■□□□□ 0.82
PHGDH-210ENST00000641115 FAM50BQ9Y247 325 aa20.19■□□□□ 0.82
PHGDH-210ENST00000641115 FARP1Q9Y4F1 1045 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-210ENST00000641115 OTOL1A6NHN0 477 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-210ENST00000641115 TULP3O75386 442 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 ZMPSTE24O75844 475 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 APRTP07741 180 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 MYBL2P10244 700 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 ECHS1P30084 290 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 CD68P34810 354 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-210ENST00000641115 LMAN1P49257 510 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 SEMA5AQ13591 1074 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 PRPSAP1Q14558 356 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 LINGO4Q6UY18 593 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 ETFBKMTQ8IXQ9 262 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 ZNF419Q96HQ0 510 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-210ENST00000641115 FMO2Q99518 471 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 NEUROG2Q9H2A3 272 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 GLOD4Q9HC38 313 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 GTSE1Q9NYZ3 720 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 TICRRQ7Z2Z1 1910 aa20.18■□□□□ 0.82
PHGDH-210ENST00000641115 CXorf51AA0A1B0GTR3 108 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 GOLGA6CA6NDK9 693 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 GOLGA6BA6NDN3 693 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 F5H423 210 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-210ENST00000641115 GOLGA6DP0CG33 693 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 SULT2A1Q06520 285 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 ITKQ08881 620 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 ITPRIPL2Q3MIP1 535 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 PUS10Q3MIT2 529 aaKnown RBP20.17■□□□□ 0.82
PHGDH-210ENST00000641115 INO80DQ53TQ3 878 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-210ENST00000641115 PTCRAQ6ISU1 281 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-210ENST00000641115 METTL3Q86U44 580 aaKnown RBP20.17■□□□□ 0.82
PHGDH-210ENST00000641115 C12orf40Q86WS4 652 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 NAT8LQ8N9F0 302 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 NXPE3Q969Y0 559 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 POLR1EQ9GZS1 481 aaKnown RBP20.17■□□□□ 0.82
PHGDH-210ENST00000641115 GOLGA6AQ9NYA3 693 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 DEC1Q9P2X7 70 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 SLC25A13Q9UJS0 675 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 SLC27A6Q9Y2P4 619 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 ATP8A1Q9Y2Q0 1164 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 ACTL7AQ9Y615 435 aa20.17■□□□□ 0.82
PHGDH-210ENST00000641115 XIRP2A4UGR9 3374 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 DYNC1I1O14576 645 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 TP73O15350 636 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 KCNJ11Q14654 390 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 GAB4Q2WGN9 574 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 KIAA0907Q7Z7F0 614 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-210ENST00000641115 CSGALNACT1Q8TDX6 532 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 WFIKKN2Q8TEU8 576 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 PRCCQ92733 491 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-210ENST00000641115 PSKH2Q96QS6 385 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 FCRL5Q96RD9 977 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 ARNTLO00327 626 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 ANXA9O76027 345 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 TMCC1O94876 653 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 POLR2EP19388 210 aaKnown RBP20.16■□□□□ 0.82
PHGDH-210ENST00000641115 TPSB2P20231 275 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 HSPA9P38646 679 aaKnown RBP20.16■□□□□ 0.82
PHGDH-210ENST00000641115 MAGEA6P43360 314 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 SERPINH1P50454 418 aaKnown RBP20.16■□□□□ 0.82
PHGDH-210ENST00000641115 MAXP61244 160 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 SLC20A2Q08357 652 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 TPSAB1Q15661 275 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 AAK1Q2M2I8 961 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 SYCP2LQ5T4T6 812 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 GRAMD4Q6IC98 578 aa20.16■□□□□ 0.82
PHGDH-210ENST00000641115 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.16■□□□□ 0.82
PHGDH-210ENST00000641115 TTC8Q8TAM2 541 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms