RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 NCF1CA8MVU1 366 aaPredicted RBP8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 TRIM38O00635 465 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 TYROBPO43914 113 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 HNRNPCP07910 306 aaKnown RBP eCLIP8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 MMP3P08254 477 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CCDC166P0CW27 439 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 NCF1P14598 390 aaPredicted RBP8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 OR1E1P30953 314 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CLDN10P78369 228 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 SLC18A2Q05940 514 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 POLD3Q15054 466 aaPredicted RBP8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 PDK3Q15120 406 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CA9Q16790 459 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 MSS51Q4VC12 460 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CERCAMQ5T4B2 595 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 RNF180Q86T96 592 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 TMEM110Q86TL2 294 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 TMEM192Q8IY95 271 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 ZNF567Q8N184 647 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 NETO2Q8NC67 525 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 RCN3Q96D15 328 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 HNRNPABQ99729 332 aaKnown RBP8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 THUMPD3Q9BV44 507 aaKnown RBP8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 APOL5Q9BWW9 433 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 SLC4A5Q9BY07 1137 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 ADGRE3Q9BY15 652 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 NFKBIZQ9BYH8 718 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 RUBCNLQ9H714 662 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 SCUBE2Q9NQ36 999 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CASS4Q9NQ75 786 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 WWOXQ9NZC7 414 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 KANSL3Q9P2N6 904 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 PCDHB8Q9UN66 801 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CNTN6Q9UQ52 1028 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 IPPQ9Y573 584 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 V9GYQ6 96 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 SMIM31A0A1B0GVY4 71 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 BAIAP3O94812 1187 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 METTL18O95568 372 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CYBBP04839 570 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CYP3A5P20815 502 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 L1CAMP32004 1257 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 SERPINB10P48595 397 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 FCGRTP55899 365 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 PSME3P61289 254 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 GALNTL6Q49A17 601 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 BRMS1LQ5PSV4 323 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CACHD1Q5VU97 1274 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 PCDH20Q8N6Y1 951 aaKnown RBP8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 MYLPFQ96A32 169 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 SLC9A7Q96T83 725 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 POLR1EQ9GZS1 481 aaKnown RBP8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 ADAM7Q9H2U9 754 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 POLG2Q9UHN1 485 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 CRLS1Q9UJA2 301 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 PCDHGB4Q9UN71 923 aa8.71□□□□□ -1.02
HNRNPU-219ENST00000639628 GRIN3BO60391 1043 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 PEX11AO75192 247 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 SNRPB2P08579 225 aaKnown RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 PRDX6P30041 224 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 POLD2P49005 469 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 ZBTB17Q13105 803 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 TARBP2Q15633 366 aaKnown RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 ATP6AP1LQ52LC2 224 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 DCLRE1AQ6PJP8 1040 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 PCSK9Q8NBP7 692 aaKnown RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 CDK5RAP1Q96SZ6 601 aaKnown RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 GBA3Q9H227 469 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 CAB39LQ9H9S4 337 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 IGSF9Q9P2J2 1179 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 MYRFQ9Y2G1 1151 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 FARP1Q9Y4F1 1045 aaPredicted RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 PCDHB7Q9Y5E2 793 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 MYH7BA7E2Y1 1941 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 A0A0G2JLL6 359 aaPredicted RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 TMEM247A6NEH6 219 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 RHOCP08134 193 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 IRF1P10914 325 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 YWHAQP27348 245 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 LRPAP1P30533 357 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 SCNN1BP51168 640 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 MRPS6P82932 125 aaKnown RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 BEX3Q00994 111 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 GHRHRQ02643 423 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 CTBP1Q13363 440 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 PPM1JQ5JR12 505 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 FAM45BPQ6NSW5 357 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 PKN3Q6P5Z2 889 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 CYP2R1Q6VVX0 501 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 MOB2Q70IA6 237 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 PRRT2Q7Z6L0 340 aaPredicted RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 TTC7BQ86TV6 843 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 MAB21L3Q8N8X9 362 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 TERB1Q8NA31 727 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 FAM45AQ8TCE6 357 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 MAML3Q96JK9 1138 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 CLPTM1LQ96KA5 538 aa8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 PRPF18Q99633 342 aaKnown RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 KCTD14Q9BQ13 255 aaPredicted RBP8.7□□□□□ -1.02
HNRNPU-219ENST00000639628 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms