RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-215ENST00000638589 PGAP2Q9UHJ9 254 aa3.79□□□□□ -1.8
HNRNPU-215ENST00000638589 CNTN6Q9UQ52 1028 aa3.79□□□□□ -1.8
HNRNPU-215ENST00000638589 VIRMAQ69YN4 1812 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 COL18A1P39060 1754 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 RGPD5Q99666 1765 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ZBED9Q6R2W3 1325 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 TTC21BQ7Z4L5 1316 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 WDR17Q8IZU2 1322 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 SYNRGQ9UMZ2 1314 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 GOLGA6L3A6NEY3 463 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 SLC38A8A6NNN8 435 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 P4HA2O15460 535 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ACTL6BO94805 426 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 CSTBP04080 98 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 PRR35P0CG20 571 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 NPPBP16860 134 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 CAPN2P17655 700 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ADRA1DP25100 572 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ALDH18A1P54886 795 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ZNF91Q05481 1191 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 SLC18B1Q6NT16 456 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 RETSATQ6NUM9 610 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 DHRS13Q6UX07 377 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 MYLK4Q86YV6 388 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 TEX11Q8IYF3 940 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 C8orf58Q8NAV2 365 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 OSR1Q8TAX0 266 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ASB12Q8WXK4 309 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 AKAP1Q92667 903 aaKnown RBP eCLIP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 C3orf49Q96BT1 292 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 GCC1Q96CN9 775 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 SPAG5Q96R06 1193 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 GATA5Q9BWX5 397 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 MYLK2Q9H1R3 596 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ELAC1Q9H777 363 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 PLEKHA2Q9HB19 425 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 NFKBIL1Q9UBC1 381 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 RNF7Q9UBF6 113 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 RABL2AQ9UBK7 228 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ODF2LQ9ULJ1 636 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 FZD4Q9ULV1 537 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 LMO7Q8WWI1 1683 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 RGPD2P0DJD1 1756 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 AHDC1Q5TGY3 1603 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 COL22A1Q8NFW1 1626 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 CXorf65A6NEN9 183 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 CHL1O00533 1208 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 PLOD3O60568 738 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 SLC3A2P08195 630 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 CKMT1AP12532 417 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 AKR1B1P15121 316 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 WT1P19544 449 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 TAS2R50P59544 299 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 CFHR3Q02985 330 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 PRKG2Q13237 762 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 TEDDM1Q5T9Z0 273 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 KLHL17Q6TDP4 642 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 FASTKD5Q7L8L6 764 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 WDR53Q7Z5U6 358 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 RHPN2Q8IUC4 686 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 NRSN1Q8IZ57 195 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ARL14EPQ8N8R7 260 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 TBC1D5Q92609 795 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ZBTB9Q96C00 473 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 CCDC17Q96LX7 622 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 RMDN3Q96TC7 470 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 SLC26A6Q9BXS9 759 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 CDCP1Q9H5V8 836 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 PDP2Q9P2J9 529 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 COX11Q9Y6N1 276 aa3.78□□□□□ -1.8
HNRNPU-215ENST00000638589 ROBO1Q9Y6N7 1651 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 MSH6P52701 1360 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 LRRC37A3O60309 1634 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 TCRBV7S3A2A0A539 114 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 DNAJC9-AS1A6NH13 148 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 LINC01548A6NM66 108 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 STX16-NPEPL1H3BU86 382 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 EIF3FO00303 357 aaPredicted RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 PES1O00541 588 aaKnown RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 STX16O14662 325 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 IPO8O15397 1037 aaKnown RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 SKAP2O75563 359 aaPredicted RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 C1RP00736 705 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 ALDOCP09972 364 aaKnown RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 RFPL3SP0C7P2 107 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 RXRAP19793 462 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 HOXA7P31268 230 aaPredicted RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 TNNT2P45379 298 aaPredicted RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 TUBA4AP68366 448 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 TXNL4AP83876 142 aaKnown RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 TBX2Q13207 712 aaPredicted RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 KRT72Q14CN4 511 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 LARS2Q15031 903 aaKnown RBP3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 RPS6KA2Q15349 733 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 AAK1Q2M2I8 961 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 FAM205BPQ63HN1 556 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 PGBD2Q6P3X8 592 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 ACSM6Q6P461 480 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 CYP26C1Q6V0L0 522 aa3.77□□□□□ -1.81
HNRNPU-215ENST00000638589 MTERF4Q7Z6M4 381 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms