RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 EPHA3P29320 983 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 CLCNKBP51801 687 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 SMAD3P84022 425 aaKnown RBP14.54□□□□□ -0.08
SCARB2-208ENST00000638372 TRAF2Q12933 501 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 YTHDF3Q7Z739 585 aaKnown RBP14.54□□□□□ -0.08
SCARB2-208ENST00000638372 MON1AQ86VX9 555 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 CENPLQ8N0S6 344 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-208ENST00000638372 PTGR2Q8N8N7 351 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-208ENST00000638372 OR56A4Q8NGH8 313 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 DERAQ9Y315 318 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 COL1A2P08123 1366 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 ZNF536O15090 1300 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 MOXD2PA6NHM9 499 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 HNRNPLP14866 589 aaKnown RBP eCLIP14.54□□□□□ -0.08
SCARB2-208ENST00000638372 MSH3P20585 1137 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 CDC25CP30307 473 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 HSPA13P48723 471 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 SLC1A5Q15758 541 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 IMPAD1Q9NX62 359 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 SCN3BQ9NY72 215 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 LNPEPQ9UIQ6 1025 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 LZTS1Q9Y250 596 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 ZNF711Q9Y462 761 aa14.54□□□□□ -0.08
SCARB2-208ENST00000638372 M0R3G1 203 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 EDF1O60869 148 aaKnown RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 ARIH2O95376 493 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 FGFR1P11362 822 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 CREB1P16220 341 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 NDUFV1P49821 464 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 MAP3K10Q02779 954 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 USP4Q13107 963 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 XRCC4Q13426 336 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 FNBP1LQ5T0N5 605 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 SH3PXD2AQ5TCZ1 1133 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 LRRC8DQ7L1W4 858 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 SLC26A9Q7LBE3 791 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 PHACTR4Q8IZ21 702 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 PLEKHA8Q96JA3 519 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 SH3GL2Q99962 352 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 KCTD14Q9BQ13 255 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 MSCO60682 206 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 PEX11AO75192 247 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 ATXN1P54253 815 aaKnown RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 OASLQ15646 514 aaKnown RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 CHADLQ6NUI6 762 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 LRRC74BQ6ZQY2 392 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 PLD3Q8IV08 490 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 GRIN3AQ8TCU5 1115 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 TRPC4APQ8TEL6 797 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 FIG4Q92562 907 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 CASP10Q92851 521 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 NSMCE2Q96MF7 247 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 UROC1Q96N76 676 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 MLPHQ9BV36 600 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 FZD8Q9H461 694 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 ASB8Q9H765 288 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 C15orf41Q9Y2V0 281 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 KANSL1LA0AUZ9 987 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 ASGR1P07306 291 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 CFHP08603 1231 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 TSHRP16473 764 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 FBXW4P57775 412 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 TAF10Q12962 218 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 TARBP2Q15633 366 aaKnown RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 SCIMPQ6UWF3 145 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 LPIN3Q9BQK8 851 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 PARP4Q9UKK3 1724 aaKnown RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 MYBPHLA2RUH7 354 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 SRRM3A6NNA2 597 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 ATP5F1P24539 256 aaPredicted RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 HOXD13P35453 343 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 CDH13P55290 713 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 VAC14Q08AM6 782 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 POM121L1PQ3SYA9 428 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 PABPC1LQ4VXU2 614 aaKnown RBP14.53□□□□□ -0.08
SCARB2-208ENST00000638372 RNF43Q68DV7 783 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 LRRC8BQ6P9F7 803 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 OTOP3Q7RTS5 596 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 ADCK1Q86TW2 530 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 DHFR2Q86XF0 187 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 C10orf107Q8IVU9 208 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 HIC2Q96JB3 615 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 ACSS2Q9NR19 701 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 ARL15Q9NXU5 204 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 STXBP5LQ9Y2K9 1186 aa14.53□□□□□ -0.08
SCARB2-208ENST00000638372 A0A0G2JLL6 359 aaPredicted RBP14.52□□□□□ -0.08
SCARB2-208ENST00000638372 PSMD12O00232 456 aaPredicted RBP14.52□□□□□ -0.08
SCARB2-208ENST00000638372 C22orf31O95567 290 aa14.52□□□□□ -0.08
SCARB2-208ENST00000638372 C2P06681 752 aa14.52□□□□□ -0.08
SCARB2-208ENST00000638372 MAPK1P28482 360 aa14.52□□□□□ -0.08
SCARB2-208ENST00000638372 HPCAP84074 193 aa14.52□□□□□ -0.08
SCARB2-208ENST00000638372 UBAP2LQ14157 1087 aaKnown RBP14.52□□□□□ -0.08
SCARB2-208ENST00000638372 GALNT3Q14435 633 aa14.52□□□□□ -0.08
SCARB2-208ENST00000638372 DEFB115Q30KQ5 88 aa14.52□□□□□ -0.08
SCARB2-208ENST00000638372 IL27RAQ6UWB1 636 aa14.52□□□□□ -0.08
SCARB2-208ENST00000638372 PRRT2Q7Z6L0 340 aaPredicted RBP14.52□□□□□ -0.08
SCARB2-208ENST00000638372 ALYREFQ86V81 257 aaKnown RBP14.52□□□□□ -0.08
SCARB2-208ENST00000638372 TRIM48Q8IWZ4 208 aa14.52□□□□□ -0.08
SCARB2-208ENST00000638372 CCDC185Q8N715 623 aa14.52□□□□□ -0.08
SCARB2-208ENST00000638372 STAG3L4Q8TBR4 150 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms