RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 HSFX1Q9UBD0 423 aa21.91■■□□□ 1.1
CLN5-215ENST00000636767 PPP2R3BQ9Y5P8 575 aa21.91■■□□□ 1.1
CLN5-215ENST00000636767 COPG1Q9Y678 874 aaKnown RBP21.91■■□□□ 1.1
CLN5-215ENST00000636767 STRNO43815 780 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 VAPBO95292 243 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 TPH1P17752 444 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 HOXA11P31270 313 aaPredicted RBP21.9■■□□□ 1.1
CLN5-215ENST00000636767 RANBP1P43487 201 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 PPIDQ08752 370 aaKnown RBP21.9■■□□□ 1.1
CLN5-215ENST00000636767 ZBTB17Q13105 803 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 FBXO47Q5MNV8 452 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 LCA5Q86VQ0 697 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 NPWQ8N729 165 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 SCYL1Q96KG9 808 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 NPAS2Q99743 824 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 SLC2A11Q9BYW1 496 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 SNX25Q9H3E2 840 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 TCAF2A6NFQ2 919 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 TARM1B6A8C7 271 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 SLCO1B7G3V0H7 640 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 RNASEH2AO75792 299 aaKnown RBP21.9■■□□□ 1.1
CLN5-215ENST00000636767 PYGLP06737 847 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 SLC35E2BP0CK96 405 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 AVPR1AP37288 418 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 TMEM259Q4ZIN3 620 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 FSTL5Q8N475 847 aaPredicted RBP21.9■■□□□ 1.1
CLN5-215ENST00000636767 CNTD1Q8N815 330 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 FAM156AQ8NDB6 213 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 TMA16Q96EY4 203 aaKnown RBP21.9■■□□□ 1.1
CLN5-215ENST00000636767 STAP1Q9ULZ2 295 aa21.9■■□□□ 1.1
CLN5-215ENST00000636767 COL1A2P08123 1366 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 ERI2A8K979 691 aaKnown RBP21.89■■□□□ 1.1
CLN5-215ENST00000636767 DDHD2O94830 711 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 NFKB1P19838 968 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 HADHAP40939 763 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 NPY2RP49146 381 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 NDUFV1P49821 464 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 USP10Q14694 798 aaKnown RBP21.89■■□□□ 1.1
CLN5-215ENST00000636767 ZNF410Q86VK4 478 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 CENPLQ8N0S6 344 aaPredicted RBP21.89■■□□□ 1.1
CLN5-215ENST00000636767 WNT8BQ93098 351 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 TSNARE1Q96NA8 513 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 RHOJQ9H4E5 214 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 ANLNQ9NQW6 1124 aa21.89■■□□□ 1.1
CLN5-215ENST00000636767 RUVBL2Q9Y230 463 aaKnown RBP21.89■■□□□ 1.1
CLN5-215ENST00000636767 OTOFQ9HC10 1997 aa21.89■■□□□ 1.09
CLN5-215ENST00000636767 MAGEB16A2A368 324 aa21.89■■□□□ 1.09
CLN5-215ENST00000636767 CCDC78A2IDD5 438 aa21.89■■□□□ 1.09
CLN5-215ENST00000636767 I6L893 689 aaPredicted RBP21.89■■□□□ 1.09
CLN5-215ENST00000636767 IRF6O14896 467 aa21.89■■□□□ 1.09
CLN5-215ENST00000636767 TCN1P20061 433 aaPredicted RBP21.89■■□□□ 1.09
CLN5-215ENST00000636767 HFE2Q6ZVN8 426 aa21.89■■□□□ 1.09
CLN5-215ENST00000636767 APBA2Q99767 749 aa21.89■■□□□ 1.09
CLN5-215ENST00000636767 RBPJLQ9UBG7 517 aa21.89■■□□□ 1.09
CLN5-215ENST00000636767 TMEM233B4DJY2 109 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 DLX3O60479 287 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 BEST1O76090 585 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 USP46P62068 366 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 LRRC8EQ6NSJ5 796 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 SLC2A13Q96QE2 648 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 XPR1Q9UBH6 696 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 BTBD19C9JJ37 291 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 PIRO00625 290 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 ADRA1BP35368 520 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 SEMA3BQ13214 749 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 LAMC2Q13753 1193 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 SLC27A1Q6PCB7 646 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 PDZD4Q76G19 769 aaPredicted RBP21.88■■□□□ 1.09
CLN5-215ENST00000636767 SLC41A1Q8IVJ1 513 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 KDM1BQ8NB78 822 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 MRPL1Q9BYD6 325 aaKnown RBP21.88■■□□□ 1.09
CLN5-215ENST00000636767 NXF3Q9H4D5 531 aaKnown RBP21.88■■□□□ 1.09
CLN5-215ENST00000636767 DDX18Q9NVP1 670 aaKnown RBP21.88■■□□□ 1.09
CLN5-215ENST00000636767 UBP1Q9NZI7 540 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 AK5Q9Y6K8 562 aa21.88■■□□□ 1.09
CLN5-215ENST00000636767 POLR2AP24928 1970 aaKnown RBP21.87■■□□□ 1.09
CLN5-215ENST00000636767 A0A1B0GTW7 788 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 CLDN5O00501 218 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 TRIM38O00635 465 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 RECQL4O94761 1208 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 CYP2C9P11712 490 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 ZNF26P17031 533 aaPredicted RBP21.87■■□□□ 1.09
CLN5-215ENST00000636767 PTPN1P18031 435 aaKnown RBP21.87■■□□□ 1.09
CLN5-215ENST00000636767 GABRB3P28472 473 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 TPI1P60174 286 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 SLC12A1Q13621 1099 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 PTK2BQ14289 1009 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 MARCH8Q5T0T0 291 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 IL23RQ5VWK5 629 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 ALKAL1Q6UXT8 129 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 DDI1Q8WTU0 396 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 GINS2Q9Y248 185 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 RAD54BQ9Y620 910 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 BRCA1P38398 1863 aaKnown RBP21.87■■□□□ 1.09
CLN5-215ENST00000636767 SHROOM3Q8TF72 1996 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 A0A0G2JLL6 359 aaPredicted RBP21.87■■□□□ 1.09
CLN5-215ENST00000636767 ZNF189O75820 626 aaPredicted RBP21.87■■□□□ 1.09
CLN5-215ENST00000636767 ZNF460Q14592 562 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 TSTD2Q5T7W7 516 aa21.87■■□□□ 1.09
CLN5-215ENST00000636767 PRRT2Q7Z6L0 340 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms