RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TSNARE1Q96NA8 513 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 SMOQ99835 787 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 GPAMQ9HCL2 828 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 WDR6Q9NNW5 1121 aaKnown RBP14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 NDFIP2Q9NV92 336 aa14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 GMPR2Q9P2T1 348 aaKnown RBP14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 TRIP12Q14669 1992 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-228ENST00000636610 DAB1O75553 588 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 STAU1O95793 577 aaKnown RBP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 SBK3P0C264 359 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 KYAT1Q16773 422 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ZNF789Q5FWF6 425 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 PITRM1Q5JRX3 1037 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 CYP2R1Q6VVX0 501 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ST13P4Q8IZP2 240 aaPredicted RBP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 SLC45A3Q96JT2 553 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 COLEC11Q9BWP8 271 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ADARB2Q9NS39 739 aaKnown RBP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 MYL3P08590 195 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 CYP2B6P20813 491 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 RPL14P50914 215 aaKnown RBP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 CLCNKBP51801 687 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 INHBEP58166 350 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 CEACAM7Q14002 265 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 CYLC2Q14093 348 aaPredicted RBP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 CSHL1Q14406 222 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 FBXO48Q5FWF7 155 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 SH2D4BQ5SQS7 431 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 TMEM135Q86UB9 458 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ZNF354CQ86Y25 554 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 MFSD6LQ8IWD5 586 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 KYQ8NBH2 561 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 C3orf58Q8NDZ4 430 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ELMO2Q96JJ3 720 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 SENP8Q96LD8 212 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 SLC39A3Q9BRY0 314 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 FICDQ9BVA6 458 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 OCEL1Q9H607 264 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 OXSMQ9NWU1 459 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 MPP6Q9NZW5 540 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 IGSF9Q9P2J2 1179 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 SFMBT1Q9UHJ3 866 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 PDE4DIPQ5VU43 2346 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 C15orf38-AP3S2A0A0A6YYH1 394 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 DLX3O60479 287 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 DNAJA2O60884 412 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 SNUPNO95149 360 aaKnown RBP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 BDNFP23560 247 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 CDK7P50613 346 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 MTTPP55157 894 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ROR2Q01974 943 aaKnown RBP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 PPP1R3AQ16821 1122 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ALKAL1Q6UXT8 129 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 FASTKD5Q7L8L6 764 aaKnown RBP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ARPINQ7Z6K5 226 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 ZNF410Q86VK4 478 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 LRGUKQ96M69 825 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 NR1H4Q96RI1 486 aaPredicted RBP14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 NAT9Q9BTE0 207 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 SPATA16Q9BXB7 569 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 IL1RL2Q9HB29 575 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 UBAP1Q9NZ09 502 aa14.25□□□□□ -0.13
CACNA1A-228ENST00000636610 hCG_2014768A0A024R1R8 64 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 KCNU1A8MYU2 1149 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 HDAC3O15379 428 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 CD4P01730 458 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 PGFP49763 221 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 MAXP61244 160 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 RBBP5Q15291 538 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 CYTH1Q15438 398 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 RYBPQ8N488 228 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 ZMIZ2Q8NF64 920 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 NPLOC4Q8TAT6 608 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 DCUN1D1Q96GG9 259 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 HNRNPABQ99729 332 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 GRIP2Q9C0E4 1043 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 TNFRSF12AQ9NP84 129 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 DDX18Q9NVP1 670 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 SORCS3Q9UPU3 1222 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 MATN2O00339 956 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 PTGESO14684 152 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 GRID2O43424 1007 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 SLC35E2BP0CK96 405 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 ITKQ08881 620 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 PAFAH1B3Q15102 231 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 SV2CQ496J9 727 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 ZNF470Q6ECI4 717 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 ZC3HC1Q86WB0 502 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 CENPLQ8N0S6 344 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 LILRA2Q8N149 483 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 SMG8Q8ND04 991 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 SREK1Q8WXA9 508 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 PHF12Q96QT6 1004 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 BRD8Q9H0E9 1235 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 WDR41Q9HAD4 459 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 CCDC167Q9P0B6 97 aa14.24□□□□□ -0.13
CACNA1A-228ENST00000636610 F8W810 466 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms