RNA–Protein interactions for RNA: ENST00000634620.1

ATP7B-213, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 5,653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-213ENST00000634620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
ATP7B-213ENST00000634620 ADCK2Q7Z695 626 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 RASGEF1CQ8N431 466 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 RTL3Q8N8U3 475 aaKnown RBP11.05□□□□□ -0.64
ATP7B-213ENST00000634620 ATG16L2Q8NAA4 619 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 DBF4BQ8NFT6 615 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 FAM81AQ8TBF8 368 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 TRAPPC12Q8WVT3 735 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 RORBQ92753 470 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 NELL2Q99435 816 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 SERHL2Q9H4I8 314 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 RMND5AQ9H871 391 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 SERHLQ9NQF3 203 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 ZMYM2Q9UBW7 1377 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 M0R2N6 131 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 CSDE1O75534 798 aaKnown RBP11.05□□□□□ -0.64
ATP7B-213ENST00000634620 ZNF682O95780 498 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 LHX1P48742 406 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 GEMP55040 296 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 NCALDP61601 193 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 ALDH6A1Q02252 535 aaKnown RBP11.05□□□□□ -0.64
ATP7B-213ENST00000634620 C1DQ13901 141 aaKnown RBP11.05□□□□□ -0.64
ATP7B-213ENST00000634620 RGS21Q2M5E4 152 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 CELF3Q5SZQ8 465 aaKnown RBP11.05□□□□□ -0.64
ATP7B-213ENST00000634620 OVOS1Q6IE37 1185 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 PHF13Q86YI8 300 aaPredicted RBP11.05□□□□□ -0.64
ATP7B-213ENST00000634620 UNC45BQ8IWX7 931 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 SYTL1Q8IYJ3 562 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 VPS33AQ96AX1 596 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 LRRC40Q9H9A6 602 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 RMI1Q9H9A7 625 aa11.05□□□□□ -0.64
ATP7B-213ENST00000634620 PNMA8CA0A1B0GUJ8 204 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 TREHO43280 583 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 GJB6O95452 261 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 CPA3P15088 417 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 PIK3R1P27986 724 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 TRAF3Q13114 568 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 AGKQ53H12 422 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 ZFP1Q6P2D0 407 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 SLC27A1Q6PCB7 646 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 SIX5Q8N196 739 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 PRELID2Q8N945 189 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 LMAN2LQ9H0V9 348 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 MMADHCQ9H3L0 296 aaPredicted RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 AAR2Q9Y312 384 aaKnown RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 CENPXA8MT69 81 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 APOC4-APOC2K7ER74 178 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 PDE9AO76083 593 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 APOC2P02655 101 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 DNTTP04053 509 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 CNGA2Q16280 664 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 SPANXN2Q5MJ10 180 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 WDR45BQ5MNZ6 344 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 OSCP1Q8WVF1 389 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 C1orf50Q9BV19 199 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 TMCC3Q9ULS5 477 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 CLCA2Q9UQC9 943 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 PHRF1Q9P1Y6 1649 aaKnown RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 COL1A1P02452 1464 aaPredicted RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 F8VP50 259 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 KLHL18O94889 574 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 SLC2A3P11169 496 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 CCDC130P13994 396 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 PTPN2P17706 415 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 ACO1P21399 889 aaKnown RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 CCT8P50990 548 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 JAM2P57087 298 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 DGKKQ5KSL6 1271 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 ZNF57Q68EA5 555 aaPredicted RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 FAM131BQ86XD5 332 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 RNFT2Q96EX2 444 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 SAR1AQ9NR31 198 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 TNFRSF21O75509 655 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 ELK3P41970 407 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 HIRAP54198 1017 aaPredicted RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 VAC14Q08AM6 782 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 OTUD3Q5T2D3 398 aaPredicted RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 ISLR2Q6UXK2 745 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 APTXQ7Z2E3 356 aaKnown RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 YTHDF3Q7Z739 585 aaKnown RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 SEPHS2Q99611 448 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 TRMT61BQ9BVS5 477 aaKnown RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 CYP4F12Q9HCS2 524 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 TCF7L2Q9NQB0 619 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 MAN1C1Q9NR34 630 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 TRMT13Q9NUP7 481 aaKnown RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 COMMD8Q9NX08 183 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 SPASTQ9UBP0 616 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 PNMA8BQ9ULN7 279 aaPredicted RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 NUDT17P0C025 328 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 MIPP30301 263 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 MARCKSL1P49006 195 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 CHN2P52757 468 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 PURAQ00577 322 aaKnown RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 POLD3Q15054 466 aaPredicted RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 DDR2Q16832 855 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 LBX2Q6XYB7 198 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 DHFR2Q86XF0 187 aa11.04□□□□□ -0.64
ATP7B-213ENST00000634620 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
ATP7B-213ENST00000634620 WWOXQ9NZC7 414 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms