RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SETD7Q8WTS6 366 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 SNX19Q92543 992 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ALS2CR12Q96Q35 445 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 TSPAN18Q96SJ8 248 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 KCNK16Q96T55 309 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 ACOX2Q99424 681 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 WNT10AQ9GZT5 417 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 DEF6Q9H4E7 631 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CD93Q9NPY3 652 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 OLFML3Q9NRN5 406 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 DNAJC17Q9NVM6 304 aaKnown RBP5.03□□□□□ -1.6
LINC00550-201ENST00000629293 GCNT4Q9P109 453 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 CALCOCO1Q9P1Z2 691 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 MYH10P35580 1976 aa5.03□□□□□ -1.6
LINC00550-201ENST00000629293 FAM187AA6NFU0 413 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 EIF4E1BA6NMX2 242 aaKnown RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 SLC9A3R1O14745 358 aaPredicted RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 CETN3O15182 167 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 SH3BP5O60239 455 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 OPHN1O60890 802 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 NDUFS2O75306 463 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 TULP3O75386 442 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 ADRB2P07550 413 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 BPIP17213 487 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 PAX3P23760 479 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 NR2F2P24468 414 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 YWHAQP27348 245 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 P2RY2P41231 377 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 CDH8P55286 799 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 POLR2FP61218 127 aaKnown RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 APBA1Q02410 837 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 GPS2Q13227 327 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 VSTM1Q6UX27 236 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 CCNI2Q6ZMN8 369 aaPredicted RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 FAM124AQ86V42 546 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 TMEM25Q86YD3 366 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 MARCH9Q86YJ5 346 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 MIB1Q86YT6 1006 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 BBS7Q8IWZ6 715 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 MRPL41Q8IXM3 137 aaKnown RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 TOP6BLQ8N6T0 577 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 LRRC52Q8N7C0 313 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 GALNT11Q8NCW6 608 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 SPATA4Q8NEY3 305 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 OLIG1Q8TAK6 271 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 TRMT2BQ96GJ1 504 aaKnown RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 FUBP3Q96I24 572 aaKnown RBP eCLIP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 ORAI3Q9BRQ5 295 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 AARSD1Q9BTE6 412 aaKnown RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 ARNT2Q9HBZ2 717 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 FAM49BQ9NUQ9 324 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 TMEM30AQ9NV96 361 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 ADAM21Q9UKJ8 722 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 CDH9Q9ULB4 789 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 CCDC66A2RUB6 948 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 RGS13O14921 159 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 ADAM23O75077 832 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 SYF2O95926 243 aaKnown RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 CST3P01034 146 aaPredicted RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 PABPC1P11940 636 aaKnown RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 GAP43P17677 238 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 ABCD1P33897 745 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 PRKCIP41743 596 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 CASP4P49662 377 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 JAM2P57087 298 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 ADAM9Q13443 819 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 ZNF268Q14587 947 aaPredicted RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 MAPRE1Q15691 268 aaKnown RBP5.02□□□□□ -1.61
LINC00550-201ENST00000629293 NKG7Q16617 165 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 ZBTB37Q5TC79 503 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 NXNQ6DKJ4 435 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 C11orf74Q86VG3 221 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 SCUBE1Q8IWY4 988 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 KBTBD7Q8WVZ9 684 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 MYRFLQ96LU7 910 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 NOX5Q96PH1 765 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 BBS2Q9BXC9 721 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 SIX2Q9NPC8 291 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 NLRC4Q9NPP4 1024 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 HSPBP1Q9NZL4 362 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 MCM8Q9UJA3 840 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 UBE4BO95155 1302 aa5.02□□□□□ -1.61
LINC00550-201ENST00000629293 CFAP46Q8IYW2 2715 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 A0A087X0T9 212 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 TRAV20A0A0B4J274 112 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 GTPBP10A4D1E9 387 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ANKRD34BA5PLL1 514 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 MEI4A8MW99 385 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 MDM4O15151 490 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 EIF3DO15371 548 aaKnown RBP eCLIP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ST8SIA5O15466 376 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 COCHO43405 550 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 CALUO43852 315 aaPredicted RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 HMBSP08397 361 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 FAM228BP0C875 321 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 PTPN1P18031 435 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 CSRP1P21291 193 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 PDE6CP51160 858 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 MYL6P60660 151 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 MRPS21P82921 87 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms