RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 RETSATQ6NUM9 610 aa15.02■□□□□ -0
PNKP-221ENST00000627317 ARHGAP12Q8IWW6 846 aa15.02■□□□□ -0
PNKP-221ENST00000627317 ATPAF2Q8N5M1 289 aa15.02■□□□□ -0
PNKP-221ENST00000627317 PQLC3Q8N755 202 aa15.02■□□□□ -0
PNKP-221ENST00000627317 NETO2Q8NC67 525 aa15.02■□□□□ -0
PNKP-221ENST00000627317 RMDN1Q96DB5 314 aa15.02■□□□□ -0
PNKP-221ENST00000627317 RPL10LQ96L21 214 aaKnown RBP15.02■□□□□ -0
PNKP-221ENST00000627317 ACE2Q9BYF1 805 aaPredicted RBP15.02■□□□□ -0
PNKP-221ENST00000627317 SLC39A8Q9C0K1 460 aa15.02■□□□□ -0
PNKP-221ENST00000627317 KLC2Q9H0B6 622 aa15.02■□□□□ -0
PNKP-221ENST00000627317 POLMQ9NP87 494 aaPredicted RBP15.02■□□□□ -0
PNKP-221ENST00000627317 STON1Q9Y6Q2 735 aa15.02■□□□□ -0
PNKP-221ENST00000627317 CHD5Q8TDI0 1954 aa15.02□□□□□ -0.01
PNKP-221ENST00000627317 hCG_1818297A0A087WSY0 165 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 ZSCAN5CA6NGD5 496 aaPredicted RBP15.01□□□□□ -0.01
PNKP-221ENST00000627317 KDELR3O43731 214 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 ALDH1A2O94788 518 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 KRT10P13645 584 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 IL12RB1P42701 662 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 PAPOLAP51003 745 aaKnown RBP15.01□□□□□ -0.01
PNKP-221ENST00000627317 ZNF211Q13398 564 aaPredicted RBP15.01□□□□□ -0.01
PNKP-221ENST00000627317 SERINC3Q13530 473 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 STARD3Q14849 445 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 CSRP2Q16527 193 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 PTPRNQ16849 979 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 SEL1L2Q5TEA6 688 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 CCDC181Q5TID7 509 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 PMS2CLQ68D20 193 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 SLC9A4Q6AI14 798 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 LINGO4Q6UY18 593 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 ATP11CQ8NB49 1132 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 KDM1BQ8NB78 822 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 HMGB4Q8WW32 186 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 MRGPRX3Q96LB0 322 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 SP110Q9HB58 689 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 SEMA4GQ9NTN9 838 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 DLL3Q9NYJ7 618 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 MBD1Q9UIS9 605 aaPredicted RBP15.01□□□□□ -0.01
PNKP-221ENST00000627317 HS3ST2Q9Y278 367 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 INVSQ9Y283 1065 aa15.01□□□□□ -0.01
PNKP-221ENST00000627317 WASH3PC4AMC7 463 aa15□□□□□ -0.01
PNKP-221ENST00000627317 SYNCRIPO60506 623 aaKnown RBP15□□□□□ -0.01
PNKP-221ENST00000627317 CST8O60676 142 aa15□□□□□ -0.01
PNKP-221ENST00000627317 ZMPSTE24O75844 475 aa15□□□□□ -0.01
PNKP-221ENST00000627317 EPHX1P07099 455 aa15□□□□□ -0.01
PNKP-221ENST00000627317 C7P10643 843 aa15□□□□□ -0.01
PNKP-221ENST00000627317 PYGMP11217 842 aa15□□□□□ -0.01
PNKP-221ENST00000627317 HLA-EP13747 358 aa15□□□□□ -0.01
PNKP-221ENST00000627317 NDUFV2P19404 249 aa15□□□□□ -0.01
PNKP-221ENST00000627317 MX2P20592 715 aa15□□□□□ -0.01
PNKP-221ENST00000627317 PRKCHP24723 683 aa15□□□□□ -0.01
PNKP-221ENST00000627317 PTPN7P35236 360 aa15□□□□□ -0.01
PNKP-221ENST00000627317 ARF5P84085 180 aa15□□□□□ -0.01
PNKP-221ENST00000627317 LMNB2Q03252 620 aa15□□□□□ -0.01
PNKP-221ENST00000627317 GBE1Q04446 702 aa15□□□□□ -0.01
PNKP-221ENST00000627317 ACCSLQ4AC99 568 aa15□□□□□ -0.01
PNKP-221ENST00000627317 USP39Q53GS9 565 aaKnown RBP15□□□□□ -0.01
PNKP-221ENST00000627317 HS1BP3Q53T59 392 aa15□□□□□ -0.01
PNKP-221ENST00000627317 C11orf74Q86VG3 221 aa15□□□□□ -0.01
PNKP-221ENST00000627317 SLC35F6Q8N357 371 aa15□□□□□ -0.01
PNKP-221ENST00000627317 SH2D3CQ8N5H7 860 aa15□□□□□ -0.01
PNKP-221ENST00000627317 PLD5Q8N7P1 536 aa15□□□□□ -0.01
PNKP-221ENST00000627317 FRMD1Q8N878 549 aa15□□□□□ -0.01
PNKP-221ENST00000627317 ZNF366Q8N895 744 aa15□□□□□ -0.01
PNKP-221ENST00000627317 HEMGNQ9BXL5 484 aa15□□□□□ -0.01
PNKP-221ENST00000627317 OSBPL8Q9BZF1 889 aa15□□□□□ -0.01
PNKP-221ENST00000627317 JRKLQ9Y4A0 524 aa15□□□□□ -0.01
PNKP-221ENST00000627317 PCDHGA5Q9Y5G8 931 aa15□□□□□ -0.01
PNKP-221ENST00000627317 HEY1Q9Y5J3 304 aa15□□□□□ -0.01
PNKP-221ENST00000627317 RAD54BQ9Y620 910 aa15□□□□□ -0.01
PNKP-221ENST00000627317 NUP205Q92621 2012 aa15□□□□□ -0.01
PNKP-221ENST00000627317 TTC34A8MYJ7 566 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 KCNK3O14649 394 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 PRAMEF11O60813 436 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 MAP3K6O95382 1288 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 MT-CO1P00395 513 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 SRCP12931 536 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 TGM2P21980 687 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 SERPINH1P50454 418 aaKnown RBP14.99□□□□□ -0.01
PNKP-221ENST00000627317 VASPP50552 380 aaPredicted RBP14.99□□□□□ -0.01
PNKP-221ENST00000627317 CLCN6P51797 869 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 SLC20A2Q08357 652 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 GALNT2Q10471 571 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 DCAF12L1Q5VU92 463 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 LEKR1Q6ZMV7 388 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 PRR23CQ6ZRP0 262 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 LRRC49Q8IUZ0 686 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 TP53INP2Q8IXH6 220 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 C17orf53Q8N3J3 647 aaPredicted RBP14.99□□□□□ -0.01
PNKP-221ENST00000627317 RLN3Q8WXF3 142 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 MYO19Q96H55 970 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 MRGPRX1Q96LB2 322 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 TLR10Q9BXR5 811 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 ARRDC1-AS1Q9H2J1 176 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 TMEM245Q9H330 911 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 KCND1Q9NSA2 647 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 DTLQ9NZJ0 730 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 UBA2Q9UBT2 640 aaPredicted RBP14.99□□□□□ -0.01
PNKP-221ENST00000627317 SUN2Q9UH99 717 aa14.99□□□□□ -0.01
PNKP-221ENST00000627317 IPO11Q9UI26 975 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms