RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PRKCHP24723 683 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 SSTR4P31391 388 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 SDC4P31431 198 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 RDXP35241 583 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 CSKP41240 450 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 CD97P48960 835 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 CXCR3P49682 368 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 ATXN3P54252 364 aaPredicted RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 ATXN1P54253 815 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 ECT2LQ008S8 904 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 FMO1Q01740 532 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 ZBTB16Q05516 673 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 ENPP2Q13822 863 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 AUHQ13825 339 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 CLEC16AQ2KHT3 1053 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 TTC31Q49AM3 519 aaPredicted RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 ACCSLQ4AC99 568 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 C2CD6Q53TS8 623 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 PITRM1Q5JRX3 1037 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 RNF43Q68DV7 783 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 PPP1R2P3Q6NXS1 205 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 FBXL22Q6P050 247 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 XKR5Q6UX68 686 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 ACAD11Q709F0 780 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 PHLDB2Q86SQ0 1253 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 CACUL1Q86Y37 369 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 DHX40Q8IX18 779 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 CCAR2Q8N163 923 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 FRMD1Q8N878 549 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 ZNF366Q8N895 744 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 OR2T3Q8NH03 318 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 SLC30A5Q8TAD4 765 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 CEP76Q8TAP6 659 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 WFDC5Q8TCV5 224 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 GANCQ8TET4 914 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 TTC17Q96AE7 1141 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 PGAP3Q96FM1 320 aaPredicted RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 KLHDC7BQ96G42 594 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 FAM46AQ96IP4 442 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 CFAP57Q96MR6 1250 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 TBCBQ99426 244 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 NPY6RQ99463 290 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 AGPAT1Q99943 283 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 C11orf70Q9BRQ4 267 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 NUP58Q9BVL2 599 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 SELENOOQ9BVL4 669 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 NUSAP1Q9BXS6 441 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 MKRN2Q9H000 416 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 SLC6A17Q9H1V8 727 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 SMOC1Q9H4F8 434 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 ITM2CQ9NQX7 267 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 METTL5Q9NRN9 209 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 PIGVQ9NUD9 493 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 ARHGEF38Q9NXL2 777 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 MBD1Q9UIS9 605 aaPredicted RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 SLC25A13Q9UJS0 675 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 NOCTQ9UK39 431 aaKnown RBP6.58□□□□□ -1.36
TCF4-249ENST00000625716 VANGL2Q9ULK5 521 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 MYO6Q9UM54 1294 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 ERVW-1Q9UQF0 538 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 HS3ST4Q9Y661 456 aa6.58□□□□□ -1.36
TCF4-249ENST00000625716 KIAA1549LQ6ZVL6 1849 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 EDDM13A0A1B0GTR0 161 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 A0A1W2PQC6 194 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 TARSL2A2RTX5 802 aaKnown RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 SLC30A4O14863 429 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 TEX33O43247 280 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 SRGAP2O75044 1071 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 ADCY5O95622 1261 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 CFIP05156 583 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 RHOCP08134 193 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 KRT3P12035 628 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 CHRNB2P17787 502 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 MMP8P22894 467 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 ITPKAP23677 461 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 HOXD12P35452 270 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 FLT3P36888 993 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 PTGER3P43115 390 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 TPMTP51580 245 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 COPAP53621 1224 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 LIMK1P53667 647 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 CDH4P55283 916 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 KRT83P78385 493 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 GFPT1Q06210 699 aaPredicted RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 ZNF33AQ06730 810 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 EIF4EBP2Q13542 120 aaPredicted RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 ASIC2Q16515 512 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 CDO1Q16878 200 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 DUOXA1Q1HG43 343 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 PLEKHG6Q3KR16 790 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 TRIM61Q5EBN2 209 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 FSCBQ5H9T9 825 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 STPG1Q5TH74 334 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 SFMBT2Q5VUG0 894 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 DAB2IPQ5VWQ8 1189 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 HGSNATQ68CP4 663 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 ZNF776Q68DI1 518 aaPredicted RBP6.57□□□□□ -1.36
TCF4-249ENST00000625716 TCEAL6Q6IPX3 200 aa6.57□□□□□ -1.36
TCF4-249ENST00000625716 DNAJC24Q6P3W2 148 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms