RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 SNX21Q969T3 373 aa15.03■□□□□ -0
PNKP-218ENST00000625299 CCDC34Q96HJ3 373 aa15.03■□□□□ -0
PNKP-218ENST00000625299 SLC4A5Q9BY07 1137 aa15.03■□□□□ -0
PNKP-218ENST00000625299 TNKS2Q9H2K2 1166 aa15.03■□□□□ -0
PNKP-218ENST00000625299 THAP9Q9H5L6 903 aa15.03■□□□□ -0
PNKP-218ENST00000625299 METTL14Q9HCE5 456 aaKnown RBP15.03■□□□□ -0
PNKP-218ENST00000625299 OR51B4Q9Y5P0 310 aa15.03■□□□□ -0
PNKP-218ENST00000625299 HS3ST4Q9Y661 456 aa15.03■□□□□ -0
PNKP-218ENST00000625299 RP1P56715 2156 aa15.02■□□□□ -0
PNKP-218ENST00000625299 POM121BA6NF01 834 aa15.02■□□□□ -0
PNKP-218ENST00000625299 THAP12O43422 761 aa15.02■□□□□ -0
PNKP-218ENST00000625299 GRAP2O75791 330 aa15.02■□□□□ -0
PNKP-218ENST00000625299 ENDOD1O94919 500 aa15.02■□□□□ -0
PNKP-218ENST00000625299 TNFSF15O95150 251 aa15.02■□□□□ -0
PNKP-218ENST00000625299 LETM1O95202 739 aaPredicted RBP15.02■□□□□ -0
PNKP-218ENST00000625299 CSF2P04141 144 aa15.02■□□□□ -0
PNKP-218ENST00000625299 RHOCP08134 193 aa15.02■□□□□ -0
PNKP-218ENST00000625299 NME1P15531 152 aaKnown RBP15.02■□□□□ -0
PNKP-218ENST00000625299 LRRC63Q05C16 580 aa15.02■□□□□ -0
PNKP-218ENST00000625299 CLN3Q13286 438 aa15.02■□□□□ -0
PNKP-218ENST00000625299 PDE1CQ14123 709 aaPredicted RBP15.02■□□□□ -0
PNKP-218ENST00000625299 FZD2Q14332 565 aa15.02■□□□□ -0
PNKP-218ENST00000625299 NR0B2Q15466 257 aa15.02■□□□□ -0
PNKP-218ENST00000625299 ZNF658Q5TYW1 1059 aaPredicted RBP15.02■□□□□ -0
PNKP-218ENST00000625299 LINGO4Q6UY18 593 aa15.02■□□□□ -0
PNKP-218ENST00000625299 KYAT3Q6YP21 454 aaKnown RBP15.02■□□□□ -0
PNKP-218ENST00000625299 C14orf80Q86SX3 495 aa15.02■□□□□ -0
PNKP-218ENST00000625299 DCP2Q8IU60 420 aaKnown RBP15.02■□□□□ -0
PNKP-218ENST00000625299 TMIEQ8NEW7 156 aa15.02■□□□□ -0
PNKP-218ENST00000625299 PPP1R16AQ96I34 528 aa15.02■□□□□ -0
PNKP-218ENST00000625299 BMFQ96LC9 184 aa15.02■□□□□ -0
PNKP-218ENST00000625299 C2orf49Q9BVC5 232 aaPredicted RBP15.02■□□□□ -0
PNKP-218ENST00000625299 SIK2Q9H0K1 926 aa15.02■□□□□ -0
PNKP-218ENST00000625299 IL36AQ9UHA7 158 aa15.02■□□□□ -0
PNKP-218ENST00000625299 VPS51Q9UID3 782 aa15.02■□□□□ -0
PNKP-218ENST00000625299 HS3ST2Q9Y278 367 aa15.02■□□□□ -0
PNKP-218ENST00000625299 PCDHGA8Q9Y5G5 932 aa15.02■□□□□ -0
PNKP-218ENST00000625299 CASC3O15234 703 aaKnown RBP15.01□□□□□ -0.01
PNKP-218ENST00000625299 RAD51BO15315 384 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 AQP9O43315 295 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 MED7O43513 233 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 SMAD6O43541 496 aaKnown RBP15.01□□□□□ -0.01
PNKP-218ENST00000625299 LZTS3O60299 673 aaPredicted RBP15.01□□□□□ -0.01
PNKP-218ENST00000625299 CLDN11O75508 207 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 PAK4O96013 591 aaPredicted RBP15.01□□□□□ -0.01
PNKP-218ENST00000625299 JUNDP17535 347 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 RECQLP46063 649 aaPredicted RBP15.01□□□□□ -0.01
PNKP-218ENST00000625299 SKOR1P84550 965 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 GCNT1Q02742 428 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 PDCLQ13371 301 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 EIF4EBP2Q13542 120 aaPredicted RBP15.01□□□□□ -0.01
PNKP-218ENST00000625299 FGL2Q14314 439 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 TMEM259Q4ZIN3 620 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 PERM1Q5SV97 790 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 TMEM110Q86TL2 294 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 WDR36Q8NI36 951 aaKnown RBP15.01□□□□□ -0.01
PNKP-218ENST00000625299 LMO3Q8TAP4 145 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 FAM174AQ8TBP5 190 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 STK32AQ8WU08 396 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 GRAMD1AQ96CP6 724 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 PRR11Q96HE9 360 aaPredicted RBP15.01□□□□□ -0.01
PNKP-218ENST00000625299 KREMEN1Q96MU8 473 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 PSMB7Q99436 277 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 IL12RB2Q99665 862 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 SLC17A9Q9BYT1 436 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 GTPBP4Q9BZE4 634 aaKnown RBP15.01□□□□□ -0.01
PNKP-218ENST00000625299 NCKIPSDQ9NZQ3 722 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 KLF15Q9UIH9 416 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
PNKP-218ENST00000625299 SPTY2D1-AS1A0A0U1RR47 76 aa15□□□□□ -0.01
PNKP-218ENST00000625299 A0A1W2PQ27 194 aa15□□□□□ -0.01
PNKP-218ENST00000625299 A0A1W2PQ64 194 aa15□□□□□ -0.01
PNKP-218ENST00000625299 EME2A4GXA9 379 aaPredicted RBP15□□□□□ -0.01
PNKP-218ENST00000625299 CDRT15L2A8MXV6 281 aa15□□□□□ -0.01
PNKP-218ENST00000625299 PAGE1O75459 146 aa15□□□□□ -0.01
PNKP-218ENST00000625299 LEFTY1O75610 366 aa15□□□□□ -0.01
PNKP-218ENST00000625299 CNTN5O94779 1100 aa15□□□□□ -0.01
PNKP-218ENST00000625299 ADCY5O95622 1261 aa15□□□□□ -0.01
PNKP-218ENST00000625299 GNA15P30679 374 aa15□□□□□ -0.01
PNKP-218ENST00000625299 RABIFP47224 123 aa15□□□□□ -0.01
PNKP-218ENST00000625299 CSRP3P50461 194 aa15□□□□□ -0.01
PNKP-218ENST00000625299 NEK3P51956 506 aa15□□□□□ -0.01
PNKP-218ENST00000625299 CDH4P55283 916 aa15□□□□□ -0.01
PNKP-218ENST00000625299 RPS21P63220 83 aaKnown RBP15□□□□□ -0.01
PNKP-218ENST00000625299 KIAA1161Q6NSJ0 714 aa15□□□□□ -0.01
PNKP-218ENST00000625299 C22orf39Q6P5X5 142 aa15□□□□□ -0.01
PNKP-218ENST00000625299 RBFAQ8N0V3 343 aa15□□□□□ -0.01
PNKP-218ENST00000625299 TPCN2Q8NHX9 752 aa15□□□□□ -0.01
PNKP-218ENST00000625299 SLC2A13Q96QE2 648 aa15□□□□□ -0.01
PNKP-218ENST00000625299 CCNL2Q96S94 520 aaPredicted RBP15□□□□□ -0.01
PNKP-218ENST00000625299 HDAC8Q9BY41 377 aa15□□□□□ -0.01
PNKP-218ENST00000625299 ACP6Q9NPH0 428 aa15□□□□□ -0.01
PNKP-218ENST00000625299 GPR27Q9NS67 375 aa15□□□□□ -0.01
PNKP-218ENST00000625299 TBC1D30Q9Y2I9 924 aa15□□□□□ -0.01
PNKP-218ENST00000625299 SNX10Q9Y5X0 201 aa15□□□□□ -0.01
PNKP-218ENST00000625299 HS3ST3A1Q9Y663 406 aa15□□□□□ -0.01
PNKP-218ENST00000625299 CSNK1G3Q9Y6M4 447 aa15□□□□□ -0.01
PNKP-218ENST00000625299 FPGTO14772 594 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 HSF2BPO75031 334 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 TCEA3O75764 348 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms