RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CLPBQ9H078 707 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 DMAC2Q9NW81 257 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 GULP1Q9UBP9 304 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 APOBEC3BQ9UH17 382 aaKnown RBP14.24□□□□□ -0.13
SNX1-214ENST00000625244 CSMD2Q7Z408 3487 aa14.24□□□□□ -0.13
SNX1-214ENST00000625244 APCP25054 2843 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.23□□□□□ -0.13
SNX1-214ENST00000625244 KPNA3O00505 521 aaPredicted RBP14.23□□□□□ -0.13
SNX1-214ENST00000625244 SEMA7AO75326 666 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 ANXA6P08133 673 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 CELA2BP08218 269 aaPredicted RBP14.23□□□□□ -0.13
SNX1-214ENST00000625244 GNLYP22749 145 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 DAOAP59103 153 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 ZFP36L1Q07352 338 aaKnown RBP14.23□□□□□ -0.13
SNX1-214ENST00000625244 KNOP1Q1ED39 458 aaKnown RBP14.23□□□□□ -0.13
SNX1-214ENST00000625244 GOLGA7BQ2TAP0 167 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 BRAPQ7Z569 592 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 SIX6OS1Q8N1H7 587 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 TAS1R2Q8TE23 839 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 BTN2A2Q8WVV5 523 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 ERCC4Q92889 916 aaPredicted RBP14.23□□□□□ -0.13
SNX1-214ENST00000625244 NKD1Q969G9 470 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 ABHD17AQ96GS6 310 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 DNAI2Q9GZS0 605 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 TNMDQ9H2S6 317 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 LRRN3Q9H3W5 708 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 ZNF768Q9H5H4 540 aaKnown RBP14.23□□□□□ -0.13
SNX1-214ENST00000625244 KBTBD4Q9NVX7 518 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 TRPM6Q9BX84 2022 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 UNC13CQ8NB66 2214 aa14.23□□□□□ -0.13
SNX1-214ENST00000625244 IKBKBO14920 756 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 MOCS2O96007 188 aaPredicted RBP14.22□□□□□ -0.13
SNX1-214ENST00000625244 LCP1P13796 627 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 LIFP15018 202 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
SNX1-214ENST00000625244 PLK1P53350 603 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 SLC12A1Q13621 1099 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 CAPRIN2Q6IMN6 1127 aaKnown RBP14.22□□□□□ -0.13
SNX1-214ENST00000625244 CIR1Q86X95 450 aaPredicted RBP14.22□□□□□ -0.13
SNX1-214ENST00000625244 ARL10Q8N8L6 244 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 KYQ8NBH2 561 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 KLF6Q99612 283 aaPredicted RBP14.22□□□□□ -0.13
SNX1-214ENST00000625244 IMPG2Q9BZV3 1241 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 SLC39A2Q9NP94 309 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 CNGB3Q9NQW8 809 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 SIRPGQ9P1W8 387 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 TSPAN16Q9UKR8 245 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 SDK2Q58EX2 2172 aa14.22□□□□□ -0.13
SNX1-214ENST00000625244 PRR19A6NJB7 356 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 STMND1H3BQB6 276 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 PIK3R2O00459 728 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 SPTLC2O15270 562 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 GABBR2O75899 941 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 TSHRP16473 764 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 CHRNA3P32297 505 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 ARSDP51689 593 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 RPS21P63220 83 aaKnown RBP14.21□□□□□ -0.13
SNX1-214ENST00000625244 KLRB1Q12918 225 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 BECN1Q14457 450 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 LACTB2Q53H82 288 aaPredicted RBP14.21□□□□□ -0.13
SNX1-214ENST00000625244 RAP1GAP2Q684P5 730 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 CXorf57Q6NSI4 855 aaKnown RBP14.21□□□□□ -0.13
SNX1-214ENST00000625244 ERN2Q76MJ5 926 aaKnown RBP14.21□□□□□ -0.13
SNX1-214ENST00000625244 SRRM1Q8IYB3 904 aaKnown RBP14.21□□□□□ -0.13
SNX1-214ENST00000625244 PHACTR4Q8IZ21 702 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 UBA3Q8TBC4 463 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 TMEM159Q96B96 161 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 ALG14Q96F25 216 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 SLC39A13Q96H72 371 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 CMKLR1Q99788 373 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 CISHQ9NSE2 258 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 SLC25A13Q9UJS0 675 aa14.21□□□□□ -0.13
SNX1-214ENST00000625244 FPGTO14772 594 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 NKX2-8O15522 239 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 PRKCGP05129 697 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 TACR2P21452 398 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 CASP1P29466 404 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 GCLMP48507 274 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 PFN3P60673 137 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 CCDC15Q0P6D6 951 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 BST2Q10589 180 aaKnown RBP14.2□□□□□ -0.14
SNX1-214ENST00000625244 CUL4AQ13619 759 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 E2F4Q16254 413 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 CNNM4Q6P4Q7 775 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 TMPRSS9Q7Z410 1059 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 SLC9A9Q8IVB4 645 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 CCAR2Q8N163 923 aaKnown RBP14.2□□□□□ -0.14
SNX1-214ENST00000625244 SCML4Q8N228 414 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 SH2D3CQ8N5H7 860 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 Q8N9G6 341 aaPredicted RBP14.2□□□□□ -0.14
SNX1-214ENST00000625244 CHST14Q8NCH0 376 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 TMIEQ8NEW7 156 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 OR52K2Q8NGK3 314 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 OR2A12Q8NGT7 310 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 GOLGA5Q8TBA6 731 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 CLEC4CQ8WTT0 213 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 KCTD13Q8WZ19 329 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 CATSPER2Q96P56 530 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 SRRTQ9BXP5 876 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms