RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 GABREP78334 506 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 STIM1Q13586 685 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 ARSIQ5FYB1 569 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 Q6ZSR6 202 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 ATP11CQ8NB49 1132 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 LSM14AQ8ND56 463 aaKnown RBP17.13■□□□□ 0.33
TARDBP-225ENST00000621715 VOPP1Q96AW1 172 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 LGMNQ99538 433 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 MUC3BQ9H195 1237 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 ASCL3Q9NQ33 180 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 ASNSD1Q9NWL6 643 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 MPP6Q9NZW5 540 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 ZNF212Q9UDV6 495 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 WASF2Q9Y6W5 498 aa17.13■□□□□ 0.33
TARDBP-225ENST00000621715 USP12O75317 370 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 CLDN11O75508 207 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 DAB1O75553 588 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 HNRNPA2B1P22626 353 aaKnown RBP17.12■□□□□ 0.33
TARDBP-225ENST00000621715 USP8P40818 1118 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 CDH4P55283 916 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 OXCT1P55809 520 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 CFHR1Q03591 330 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 FZD2Q14332 565 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 EFHC1Q5JVL4 640 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 TRNP1Q6NT89 227 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 FOXR2Q6PJQ5 311 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 DPY19L3Q6ZPD9 716 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 C11orf57Q6ZUT1 292 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-225ENST00000621715 TFAP2DQ7Z6R9 452 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 TMIEQ8NEW7 156 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 OR7D4Q8NG98 312 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 SHC3Q92529 594 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 NPY6RQ99463 290 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.12■□□□□ 0.33
TARDBP-225ENST00000621715 TKTL2Q9H0I9 626 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 ARHGEF38Q9NXL2 777 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 PNMA8BQ9ULN7 279 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-225ENST00000621715 PCDHGC3Q9UN70 934 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 MAST4O15021 2626 aa17.12■□□□□ 0.33
TARDBP-225ENST00000621715 PYCARD-AS1I3L0S3 204 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 SPINT1O43278 529 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 LEFTY1O75610 366 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 DXOO77932 396 aaKnown RBP17.11■□□□□ 0.33
TARDBP-225ENST00000621715 PCDH8O95206 1070 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 RHOCP08134 193 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 KRT10P13645 584 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 TGM2P21980 687 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 CXCR3P49682 368 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 DRAP1Q14919 205 aaPredicted RBP17.11■□□□□ 0.33
TARDBP-225ENST00000621715 ARHGAP40Q5TG30 622 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 NEK5Q6P3R8 708 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 C22orf39Q6P5X5 142 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 ERN2Q76MJ5 926 aaKnown RBP17.11■□□□□ 0.33
TARDBP-225ENST00000621715 SLC26A9Q7LBE3 791 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 ZNF605Q86T29 641 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 ZNF248Q8NDW4 579 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 HDAC8Q9BY41 377 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 SIX2Q9NPC8 291 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 DNAJC28Q9NX36 388 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 NLGN3Q9NZ94 848 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 GGT7Q9UJ14 662 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 CHD5Q8TDI0 1954 aa17.11■□□□□ 0.33
TARDBP-225ENST00000621715 DRGXA6NNA5 263 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 SCAMP1O15126 338 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 ZMPSTE24O75844 475 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 PAK4O96013 591 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-225ENST00000621715 AKT2P31751 481 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 PCBP4P57723 403 aaKnown RBP17.1■□□□□ 0.33
TARDBP-225ENST00000621715 SLC6A3Q01959 620 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 PAK1Q13153 545 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 GUSBP11Q6P575 273 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 PTAR1Q7Z6K3 402 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-225ENST00000621715 SLC47A2Q86VL8 602 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 IRF2BP1Q8IU81 584 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 FAM181AQ8N9Y4 354 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 DCAF4L2Q8NA75 395 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 ZNF548Q8NEK5 533 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-225ENST00000621715 IFI44Q8TCB0 444 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 NT5C3BQ969T7 300 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 COL26A1Q96A83 441 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 PRR11Q96HE9 360 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-225ENST00000621715 ZNF578Q96N58 590 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-225ENST00000621715 KLF6Q99612 283 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-225ENST00000621715 IL36AQ9UHA7 158 aa17.1■□□□□ 0.33
TARDBP-225ENST00000621715 BICDL2A1A5D9 508 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 GOLGA6L4A6NEF3 574 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 CD160O95971 181 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 GKP32189 559 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 NOS2P35228 1153 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 CLCN1P35523 988 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 LSSP48449 732 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 RNASE9P60153 205 aaKnown RBP17.09■□□□□ 0.33
TARDBP-225ENST00000621715 ARF5P84085 180 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-225ENST00000621715 LY6DQ14210 128 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 CDKN3Q16667 212 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 RAB6CQ53S08 254 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 DPY19L2P1Q6NXN4 242 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 CRTC1Q6UUV9 634 aa17.09■□□□□ 0.33
TARDBP-225ENST00000621715 ENOSF1Q7L5Y1 443 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms