RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 RASGEF1CQ8N431 466 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 TSEN2Q8NCE0 465 aaKnown RBP13.89□□□□□ -0.19
NEK3-210ENST00000620675 OR6K2Q8NGY2 324 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 UCMAQ8WVF2 138 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 EXOC4Q96A65 974 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 VOPP1Q96AW1 172 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 DONSONQ9NYP3 566 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 SLC25A13Q9UJS0 675 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 HPCAL4Q9UM19 191 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 MUC6Q6W4X9 2439 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 SPAG17Q6Q759 2223 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 PDE2AO00408 941 aaPredicted RBP13.89□□□□□ -0.19
NEK3-210ENST00000620675 ATP9BO43861 1147 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 SIN3BO75182 1162 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 ASLP04424 464 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 SRPRAP08240 638 aaKnown RBP13.89□□□□□ -0.19
NEK3-210ENST00000620675 GKP32189 559 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 MRPS21P82921 87 aaKnown RBP13.89□□□□□ -0.19
NEK3-210ENST00000620675 IL10RBQ08334 325 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 PPIDQ08752 370 aaKnown RBP13.89□□□□□ -0.19
NEK3-210ENST00000620675 AP1B1Q10567 949 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.89□□□□□ -0.19
NEK3-210ENST00000620675 HDAC11Q96DB2 347 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 GABRG3Q99928 467 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 UBA2Q9UBT2 640 aaPredicted RBP13.89□□□□□ -0.19
NEK3-210ENST00000620675 DNPEPQ9ULA0 475 aa13.89□□□□□ -0.19
NEK3-210ENST00000620675 DNAH14Q0VDD8 3507 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 HOXB2P14652 356 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 CASQ1P31415 396 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 CETN2P41208 172 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 RPS9P46781 194 aaKnown RBP13.88□□□□□ -0.19
NEK3-210ENST00000620675 MAXP61244 160 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 SATB1Q01826 763 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 PRKD1Q15139 912 aaPredicted RBP13.88□□□□□ -0.19
NEK3-210ENST00000620675 RETSATQ6NUM9 610 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 C22orf39Q6P5X5 142 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 CREG2Q8IUH2 290 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 FBXL6Q8N531 539 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 CHST14Q8NCH0 376 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 PBKQ96KB5 322 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 TSGA13Q96PP4 275 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 AP1M1Q9BXS5 423 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 LHX3Q9UBR4 397 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 MMP17Q9ULZ9 603 aa13.88□□□□□ -0.19
NEK3-210ENST00000620675 RBL1P28749 1068 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 NR2C2P49116 596 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 CLCN5P51795 746 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 CLCN6P51797 869 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 METAP1P53582 386 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 EIF3EP60228 445 aaKnown RBP13.87□□□□□ -0.19
NEK3-210ENST00000620675 SNX1Q13596 522 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 IHHQ14623 411 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 PDK1Q15118 436 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 LONRF2Q1L5Z9 754 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 HNRNPA1L2Q32P51 320 aaKnown RBP13.87□□□□□ -0.19
NEK3-210ENST00000620675 C9orf64Q5T6V5 341 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 SYNPOQ8N3V7 929 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 ZNF592Q92610 1267 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 HHIPQ96QV1 700 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 PRSS16Q9NQE7 514 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 SEPT10Q9P0V9 454 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 SAR1BQ9Y6B6 198 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 CEP192Q8TEP8 1941 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 CHURC1-FNTBB4DL54 471 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 H7C0C1 242 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 NCAM2O15394 837 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 INSIG1O15503 277 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 JCHAINP01591 159 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 RBP3P10745 1247 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 MX2P20592 715 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 CCNCP24863 283 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 ATP5OP48047 213 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 PXNP49023 591 aaPredicted RBP13.87□□□□□ -0.19
NEK3-210ENST00000620675 ST8SIA6P61647 398 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 LBRQ14739 615 aaKnown RBP13.87□□□□□ -0.19
NEK3-210ENST00000620675 CRY1Q16526 586 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 TSSK4Q6SA08 328 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 DPY19L3Q6ZPD9 716 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 BMP8AQ7Z5Y6 402 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 PRUNE1Q86TP1 453 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 CCDC13Q8IYE1 715 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 STK40Q8N2I9 435 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 CNTD1Q8N815 330 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 PRELID2Q8N945 189 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 OR2A12Q8NGT7 310 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 SLC35B2Q8TB61 432 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 QKIQ96PU8 341 aaKnown RBP eCLIP13.87□□□□□ -0.19
NEK3-210ENST00000620675 MKRN2Q9H000 416 aaKnown RBP13.87□□□□□ -0.19
NEK3-210ENST00000620675 PRDM16Q9HAZ2 1276 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 CD93Q9NPY3 652 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 LRRK1Q38SD2 2015 aa13.87□□□□□ -0.19
NEK3-210ENST00000620675 KNL1Q8NG31 2342 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 F5H423 210 aaPredicted RBP13.86□□□□□ -0.19
NEK3-210ENST00000620675 MATN3O15232 486 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 HLA-DQB2P05538 268 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 CTSLP07711 333 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 CCNB1P14635 433 aa13.86□□□□□ -0.19
NEK3-210ENST00000620675 KCNJ1P48048 391 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms