RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RHOQP17081 205 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 SERPINH1P50454 418 aaKnown RBP17.53■□□□□ 0.4
HMGN3-203ENST00000620514 CCT8P50990 548 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 ARSIQ5FYB1 569 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 PPP1R15BQ5SWA1 713 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 ACAD10Q6JQN1 1059 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 RETSATQ6NUM9 610 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 DPY19L3Q6ZPD9 716 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 RAB44Q7Z6P3 723 aaPredicted RBP17.53■□□□□ 0.4
HMGN3-203ENST00000620514 GLRX5Q86SX6 157 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 PRPF39Q86UA1 669 aaKnown RBP17.53■□□□□ 0.4
HMGN3-203ENST00000620514 SLCO6A1Q86UG4 719 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 MCOLN2Q8IZK6 566 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 TMIEQ8NEW7 156 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 GRIN3AQ8TCU5 1115 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 NTAN1Q96AB6 310 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 TBC1D31Q96DN5 1066 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 CCDC114Q96M63 670 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 NAP1L5Q96NT1 182 aaPredicted RBP17.53■□□□□ 0.4
HMGN3-203ENST00000620514 MCEEQ96PE7 176 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 FUCA2Q9BTY2 467 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 KDM4CQ9H3R0 1056 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 TMEM248Q9NWD8 314 aa17.53■□□□□ 0.4
HMGN3-203ENST00000620514 TP53BP1Q12888 1972 aaPredicted RBP17.53■□□□□ 0.4
HMGN3-203ENST00000620514 KMT2BQ9UMN6 2715 aaPredicted RBP17.52■□□□□ 0.4
HMGN3-203ENST00000620514 A0A1B0GTQ1 180 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 LRRC53A6NM62 1247 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 TRIM16O95361 564 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 PROS1P07225 676 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 TNFAIP3P21580 790 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 ZNF165P49910 485 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 DNA2P51530 1060 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 ZNF143P52747 638 aaPredicted RBP17.52■□□□□ 0.4
HMGN3-203ENST00000620514 SUZ12Q15022 739 aaKnown RBP17.52■□□□□ 0.4
HMGN3-203ENST00000620514 SHBQ15464 509 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 E4F1Q66K89 784 aaPredicted RBP17.52■□□□□ 0.4
HMGN3-203ENST00000620514 NAPEPLDQ6IQ20 393 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 SCYL2Q6P3W7 929 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 SLFN11Q7Z7L1 901 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 TRIM69Q86WT6 500 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 DNAAF5Q86Y56 855 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 GATA6Q92908 595 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 ARHGEF2Q92974 986 aaKnown RBP17.52■□□□□ 0.4
HMGN3-203ENST00000620514 IL36AQ9UHA7 158 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 TPX2Q9ULW0 747 aaKnown RBP17.52■□□□□ 0.4
HMGN3-203ENST00000620514 CA5BQ9Y2D0 317 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 NEUROG3Q9Y4Z2 214 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 WASF2Q9Y6W5 498 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 USP24Q9UPU5 2620 aa17.52■□□□□ 0.4
HMGN3-203ENST00000620514 DOCK9Q9BZ29 2069 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 TMCO5BA8MYB1 307 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 PCDHGA12O60330 932 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 RNGTTO60942 597 aaKnown RBP17.51■□□□□ 0.39
HMGN3-203ENST00000620514 LEFTY1O75610 366 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 PRNPP04156 253 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 ATXN1LP0C7T5 689 aaKnown RBP17.51■□□□□ 0.39
HMGN3-203ENST00000620514 CCDC172P0C7W6 258 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 RECQLP46063 649 aaPredicted RBP17.51■□□□□ 0.39
HMGN3-203ENST00000620514 MAPKAPK2P49137 400 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 NXPH1P58417 271 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 OGDHQ02218 1023 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 SLC20A2Q08357 652 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 SCAPQ12770 1279 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 IQCB1Q15051 598 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 FILIP1LQ4L180 1135 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 LEKR1Q6ZMV7 388 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 GATAD2AQ86YP4 633 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 PCDH20Q8N6Y1 951 aaKnown RBP17.51■□□□□ 0.39
HMGN3-203ENST00000620514 ADAMTS14Q8WXS8 1223 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 KLK6Q92876 244 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 SKA1Q96BD8 255 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 ELF4Q99607 663 aaPredicted RBP17.51■□□□□ 0.39
HMGN3-203ENST00000620514 CEP44Q9C0F1 390 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 PREBQ9HCU5 417 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 TOR4AQ9NXH8 423 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 MYO6Q9UM54 1294 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 MSRB2Q9Y3D2 182 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 FRYQ5TBA9 3013 aa17.51■□□□□ 0.39
HMGN3-203ENST00000620514 A0A1B0GTH6 734 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 A0A1W2PQU0 124 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 GOLGA8CPA6NN73 597 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 TLR4O00206 839 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 ATMINO43313 823 aaPredicted RBP17.5■□□□□ 0.39
HMGN3-203ENST00000620514 CCNHP51946 323 aaPredicted RBP17.5■□□□□ 0.39
HMGN3-203ENST00000620514 ASIC2Q16515 512 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 SLC45A4Q5BKX6 768 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 CARD16Q5EG05 197 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 ERN2Q76MJ5 926 aaKnown RBP17.5■□□□□ 0.39
HMGN3-203ENST00000620514 SPATS2Q86XZ4 545 aaKnown RBP17.5■□□□□ 0.39
HMGN3-203ENST00000620514 MYOCQ99972 504 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 TM6SF2Q9BZW4 377 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 DYRK4Q9NR20 520 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 GDF3Q9NR23 364 aa17.5■□□□□ 0.39
HMGN3-203ENST00000620514 APOBEC2Q9Y235 224 aaKnown RBP17.5■□□□□ 0.39
HMGN3-203ENST00000620514 ANKRD62A6NC57 917 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 DFNA5O60443 496 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 RAMP2O60895 175 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 PRLRP16471 622 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 L1CAMP32004 1257 aa17.49■□□□□ 0.39
HMGN3-203ENST00000620514 GKP32189 559 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms