RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 FAM156AQ8NDB6 213 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 WDR55Q9H6Y2 383 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 UFSP2Q9NUQ7 469 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ARHGAP28Q9P2N2 729 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SPATA2Q9UM82 520 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SP2Q02086 613 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 C11orf63Q6NUN7 778 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CHERPQ8IWX8 916 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 MPP5Q8N3R9 675 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TFB1MQ8WVM0 346 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 TRUB1Q8WWH5 349 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 STARD8Q92502 1023 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RADILQ96JH8 1075 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CCDC141Q6ZP82 1450 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 DNAJA2O60884 412 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 GJA9P57773 515 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MAD2L1Q13257 205 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 RNF111Q6ZNA4 994 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 C7orf31Q8N865 590 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 EMILIN2Q9BXX0 1053 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TNPO3Q9Y5L0 923 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 PDS5AQ29RF7 1337 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 A0A0U1RQS6 177 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 GCAP28676 217 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TMBIM6P55061 237 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ECT2LQ008S8 904 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 BIKQ13323 160 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FAM199XQ6PEV8 388 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 ZCCHC12Q6PEW1 402 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TRMT10BQ6PF06 316 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 NECAB2Q7Z6G3 386 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TMEM192Q8IY95 271 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PYROXD2Q8N2H3 581 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ERP27Q96DN0 273 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ARL5BQ96KC2 179 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TMEM9Q9P0T7 183 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SLC9A2Q9UBY0 812 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 BRWD1Q9NSI6 2320 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 UPK3BL1B0FP48 263 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 UPK3BL2E5RIL1 263 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TO15178 435 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ECE2O60344 883 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 NCAM1P13591 858 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TNFRSF8P28908 595 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 UQCRC1P31930 480 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TCF7P36402 384 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 PRKD1Q15139 912 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 ZFP69Q49AA0 526 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FAR1Q8WVX9 515 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FAM136AQ96C01 138 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 BIRC8Q96P09 236 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 HAPLN2Q9GZV7 340 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 STK32BQ9NY57 414 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 LINC00854A0A1B0GVQ3 168 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 BBOX1O75936 387 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 JAK1P23458 1154 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ALDH1A3P47895 512 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PUDPQ08623 228 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ILF3Q12906 894 aaKnown RBP eCLIP3.12□□□□□ -1.91
NEB-220ENST00000618972 PDK2Q15119 407 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FBXO48Q5FWF7 155 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FAM110BQ8TC76 370 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 THUMPD3Q9BV44 507 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 IGSF9Q9P2J2 1179 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ARHGAP5Q13017 1502 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PRMT5O14744 637 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 TCEA3O75764 348 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CAPN15O75808 1086 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 COX4I1P13073 169 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MUTP22033 750 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 STILQ15468 1287 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 DDB1Q16531 1140 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PHKG1Q16816 387 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PLEKHN1Q494U1 663 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 CCDC81Q6ZN84 652 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CDHR3Q6ZTQ4 885 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 INO80BQ9C086 356 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 SENP6Q9GZR1 1112 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 C8orf33Q9H7E9 229 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 IMPAD1Q9NX62 359 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 BTNL10A8MVZ5 291 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 THOP1P52888 689 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FMO1Q01740 532 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SLC4A11Q8NBS3 891 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 BEGAINQ9BUH8 593 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ACAT2Q9BWD1 397 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TCF7L2Q9NQB0 619 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FETUBQ9UGM5 382 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PPM1HQ9ULR3 514 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MICAL3Q7RTP6 2002 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SOBPA7XYQ1 873 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PSMD12O00232 456 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 FDFT1P37268 417 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SQLEQ14534 574 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FAM98BQ52LJ0 330 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 OR6B2Q6IFH4 312 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TMEM270Q6UE05 265 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ARPINQ7Z6K5 226 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MREGQ8N565 214 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MEIOBQ8N635 442 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms