RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CCNYL1Q8N7R7 359 aa12.45□□□□□ -0.42
MATR3-227ENST00000618441 ZNF781Q8N8C0 355 aa12.45□□□□□ -0.42
MATR3-227ENST00000618441 POMGNT1Q8WZA1 660 aa12.45□□□□□ -0.42
MATR3-227ENST00000618441 RTKNQ9BST9 563 aa12.45□□□□□ -0.42
MATR3-227ENST00000618441 DHX35Q9H5Z1 703 aaKnown RBP12.45□□□□□ -0.42
MATR3-227ENST00000618441 EFCAB1Q9HAE3 211 aa12.45□□□□□ -0.42
MATR3-227ENST00000618441 SSU72Q9NP77 194 aaKnown RBP12.45□□□□□ -0.42
MATR3-227ENST00000618441 PLSCR3Q9NRY6 295 aa12.45□□□□□ -0.42
MATR3-227ENST00000618441 PSME2Q9UL46 239 aa12.45□□□□□ -0.42
MATR3-227ENST00000618441 C2orf81A6NN90 581 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 A8MUA0 341 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 STAM2O75886 525 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 PAHP00439 452 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 ELK4P28324 431 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 P2RX3P56373 397 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 RPL7AP62424 266 aaKnown RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 ARCQ7LC44 396 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 UNC45BQ8IWX7 931 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 ESX1Q8N693 406 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 ATP6V0D2Q8N8Y2 350 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 ADAMTS16Q8TE57 1224 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 PBXIP1Q96AQ6 731 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 KREMEN1Q96MU8 473 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 MOV10Q9HCE1 1003 aaKnown RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 EIF2B4Q9UI10 523 aaKnown RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 EDARQ9UNE0 448 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 IPPQ9Y573 584 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 MTSS1O43312 755 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 BMPR1AP36894 532 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 PTPN9P43378 593 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 DGKDQ16760 1214 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 DHRSXQ8N5I4 330 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 SDCCAG3Q96C92 435 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 HOXD1Q9GZZ0 328 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 COPG2Q9UBF2 871 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 SORCS3Q9UPU3 1222 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 SYNCRIPO60506 623 aaKnown RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 TAL1P17542 331 aaPredicted RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 HDCP19113 662 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 ARNTP27540 789 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 GTF2E2P29084 291 aaKnown RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 SPCS2Q15005 226 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 SLC27A3Q5K4L6 730 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 TEDDM1Q5T9Z0 273 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 TRMT10BQ6PF06 316 aaKnown RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 PLEKHG7Q6ZR37 379 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 UNC5BQ8IZJ1 945 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 MCOLN2Q8IZK6 566 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 LILRB1Q8NHL6 650 aaPredicted RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 OLIG1Q8TAK6 271 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 FAM110BQ8TC76 370 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 JPH3Q8WXH2 748 aaPredicted RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 SGF29Q96ES7 293 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 RPL10LQ96L21 214 aaKnown RBP12.44□□□□□ -0.42
MATR3-227ENST00000618441 MCEEQ96PE7 176 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 CYP26B1Q9NR63 512 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 TMLHEQ9NVH6 421 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 GMIPQ9P107 970 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.44□□□□□ -0.428e-12■□□□□ 9.4
MATR3-227ENST00000618441 NR2E3Q9Y5X4 410 aa12.44□□□□□ -0.42
MATR3-227ENST00000618441 NUAK1O60285 661 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 CPNE3O75131 537 aaKnown RBP12.43□□□□□ -0.42
MATR3-227ENST00000618441 HTR2BP41595 481 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 SLC9A3P48764 834 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 BPIFB3P59826 476 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 CRADDP78560 199 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 SMAD4Q13485 552 aaKnown RBP12.43□□□□□ -0.42
MATR3-227ENST00000618441 GEN1Q17RS7 908 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 AGAP7PQ5VUJ5 663 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 ABRAXAS1Q6UWZ7 409 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 GK5Q6ZS86 529 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 FKBP9P1Q75LS8 142 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 GALNT7Q86SF2 657 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 TDRD5Q8NAT2 981 aaKnown RBP12.43□□□□□ -0.42
MATR3-227ENST00000618441 OR5H6Q8NGV6 325 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 ATL1Q8WXF7 558 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 ZNF778Q96MU6 729 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 PCDH9Q9HC56 1237 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 GMPR2Q9P2T1 348 aaKnown RBP12.43□□□□□ -0.42
MATR3-227ENST00000618441 SLIT2O94813 1529 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 HDAC3O15379 428 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 NRP2O60462 931 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 PPP1R18Q6NYC8 613 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 DPP8Q6V1X1 898 aaPredicted RBP12.43□□□□□ -0.42
MATR3-227ENST00000618441 SPOCD1Q6ZMY3 1216 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 CARM1Q86X55 608 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 OR7A2PQ8NGA2 310 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 OR2T3Q8NH03 318 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 CANT1Q8WVQ1 401 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 MCRS1Q96EZ8 462 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 RUBCNLQ9H714 662 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 NANOGQ9H9S0 305 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 RWDD3Q9Y3V2 267 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 RGSL1A5PLK6 1076 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 CASP2P42575 452 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 CCR10P46092 362 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 PRKCQQ04759 706 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 SULT1C3Q6IMI6 304 aa12.43□□□□□ -0.42
MATR3-227ENST00000618441 CDH24Q86UP0 819 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms