RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 LRRC8BQ6P9F7 803 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 TMC8Q8IU68 726 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 ARHGAP12Q8IWW6 846 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 PLCD3Q8N3E9 789 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 FBXO36Q8NEA4 188 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 IGSF8Q969P0 613 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 TMA16Q96EY4 203 aaKnown RBP17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 PGM2Q96G03 612 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 IL12RB2Q99665 862 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 RNF38Q9H0F5 515 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 TASP1Q9H6P5 420 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 GKN1Q9NS71 199 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 FAM86C1Q9NVL1 165 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 RBM22Q9NW64 420 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 SMPD4Q9NXE4 827 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 BFARQ9NZS9 450 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 VPS18Q9P253 973 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 FETUBQ9UGM5 382 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZFP37Q9Y6Q3 630 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 A0A1W2PRU2 124 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 SDR42E2A6NKP2 422 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 H0Y626 953 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 AGPSO00116 658 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZBTB24O43167 697 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 CDH16O75309 829 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 TMEM63AO94886 807 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 AP2A1O95782 977 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 SYF2O95926 243 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 AGTP01019 485 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 PSMB4P28070 264 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 NPY2RP49146 381 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 NUBP1P53384 320 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 GEMIN4P57678 1058 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 CYP4F8P98187 520 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 GNA12Q03113 381 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 MPPE1Q53F39 396 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 FAXCQ5TGI0 409 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 ARMC3Q5W041 872 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 IL31Q6EBC2 164 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 NADSYN1Q6IA69 706 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 HTR3DQ70Z44 454 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 CPXM2Q8N436 756 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 PDCD7Q8N8D1 485 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 DNAAF3Q8N9W5 541 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 MAML1Q92585 1016 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 FCRL5Q96RD9 977 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 PRKD2Q9BZL6 878 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 GLOD4Q9HC38 313 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 ARHGAP26Q9UNA1 814 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 TTLL3Q9Y4R7 772 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 MAD1L1Q9Y6D9 718 aa17.09■□□□□ 0.33
TRAPPC3-210ENST00000617904 GOLGA6L7A0A1B0GV03 622 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 E2F8A0AVK6 867 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 POLR3GO15318 223 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 CNTN5O94779 1100 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 NFKB1P19838 968 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 CES1P23141 567 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 MMP13P45452 471 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 ITKQ08881 620 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 SERINC3Q13530 473 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 ZNF235Q14590 738 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 ALFQ53S48 1182 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 FAM133BQ5BKY9 247 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 MPP7Q5T2T1 576 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 LGSNQ5TDP6 509 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 CASC4Q6P4E1 433 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 C3orf62Q6ZUJ4 267 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 TMEM150AQ86TG1 271 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 HS6ST3Q8IZP7 471 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 TMEM105Q8N8V8 129 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 GABPB2Q8TAK5 448 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 HMCESQ96FZ2 354 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 CYTH2Q99418 400 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 FSD1LQ9BXM9 530 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 VPS45Q9NRW7 570 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 TBC1D14Q9P2M4 693 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 ZC3H7BQ9UGR2 993 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 SLC24A2Q9UI40 661 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 NFS1Q9Y697 457 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 C2orf16Q68DN1 1984 aa17.08■□□□□ 0.32
TRAPPC3-210ENST00000617904 CACNA1HO95180 2353 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 SLC9A3R1O14745 358 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 GALR2O43603 387 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 SUN1O94901 812 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 RHOP08100 348 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 ELK3P41970 407 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 CDH17Q12864 832 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 MPP3Q13368 585 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 CDH18Q13634 790 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 LAMB3Q13751 1172 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 KCTD19Q17RG1 926 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 FNBP1LQ5T0N5 605 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 RFWD3Q6PCD5 774 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 GAREM2Q75VX8 874 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 METTL3Q86U44 580 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 ANKMY2Q8IV38 441 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 OR2W6PQ8NHA6 318 aa17.07■□□□□ 0.32
TRAPPC3-210ENST00000617904 DEPDC1BQ8WUY9 529 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms