RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 FAM133BQ5BKY9 247 aaKnown RBP17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 TEDDM1Q5T9Z0 273 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 MARC1Q5VT66 337 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 OTOAQ7RTW8 1153 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 KCNMB4Q86W47 210 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 ARMC2Q8NEN0 867 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 KIFC1Q9BW19 673 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 SLC25A51Q9H1U9 297 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 SPG21Q9NZD8 308 aa17.63■□□□□ 0.41
PCDHGC3-205ENST00000617641 GOLGA8TH3BQL2 631 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 BGNP21810 368 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 ITKQ08881 620 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 MYLKQ15746 1914 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 TAF12Q16514 161 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 ACBD5Q5T8D3 534 aaPredicted RBP17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 ATXN7L3BQ96GX2 97 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 RMDN2Q96LZ7 410 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 PPP1R2P1Q96PQ5 205 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 MECRQ9BV79 373 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 KDM4CQ9H3R0 1056 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 TRPM5Q9NZQ8 1165 aa17.62■□□□□ 0.41
PCDHGC3-205ENST00000617641 URODP06132 367 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 LAG3P18627 525 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 CRHR1P34998 444 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 CHRNA4P43681 627 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 HARS2P49590 506 aaKnown RBP17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 WNT3AP56704 352 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 PDE1BQ01064 536 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 SERINC3Q13530 473 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 STRA8Q7Z7C7 330 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 DENND1CQ8IV53 801 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 FATE1Q969F0 183 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 ENTPD7Q9NQZ7 604 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 GKN1Q9NS71 199 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 TTC24A2A3L6 582 aaPredicted RBP17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 PRRG1O14668 218 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 NEFHP12036 1026 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 ETFBP38117 255 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 ABCG1P45844 678 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 MAPKAPK2P49137 400 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 DSC2Q02487 901 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 PDE1CQ14123 709 aaPredicted RBP17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 PARP15Q460N3 678 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 PCID2Q5JVF3 399 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 GRTP1Q5TC63 336 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 KDELC1Q6UW63 502 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 CMTR2Q8IYT2 770 aaKnown RBP17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 IMP4Q96G21 291 aaKnown RBP17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 MYRFLQ96LU7 910 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 IARS2Q9NSE4 1012 aaKnown RBP17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 KLHL14Q9P2G3 628 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 HSFX1Q9UBD0 423 aa17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 LAMA2P24043 3122 aaKnown RBP17.61■□□□□ 0.41
PCDHGC3-205ENST00000617641 C2orf78A6NCI8 922 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 CD86P42081 329 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 SLC11A2P49281 568 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 TWF1Q12792 350 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 MPP3Q13368 585 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 RAB33AQ14088 237 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 LACTB2Q53H82 288 aaPredicted RBP17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 PKN3Q6P5Z2 889 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 RANBP10Q6VN20 620 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 DDX53Q86TM3 631 aaKnown RBP17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 RBBP8Q99708 897 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 RNF38Q9H0F5 515 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 STC2O76061 302 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 KLKB1P03952 638 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 IRF1P10914 325 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 RAG1P15918 1043 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 IL10RBQ08334 325 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 MTA1Q13330 715 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 IHHQ14623 411 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 KLHDC10Q6PID8 442 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 FBXO46Q6PJ61 603 aaPredicted RBP17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 PGBD5Q8N414 524 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 DCLK2Q8N568 766 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 SLC25A41Q8N5S1 370 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 TEX26Q8N6G2 289 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 ACMSDQ8TDX5 336 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 NSMCE1Q8WV22 266 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 YME1L1Q96TA2 773 aa17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 ZFP37Q9Y6Q3 630 aaPredicted RBP17.6■□□□□ 0.41
PCDHGC3-205ENST00000617641 HGSO14964 777 aaPredicted RBP17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 MMP2P08253 660 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 CORO1AP31146 461 aaKnown RBP17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 GMPRP36959 345 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 YBEYP58557 167 aaPredicted RBP17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 RPS24P62847 133 aaKnown RBP17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 OVGP1Q12889 678 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 VEPH1Q14D04 833 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 C5orf22Q49AR2 442 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 PPM1JQ5JR12 505 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 OTOP2Q7RTS6 562 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 ANKLE1Q8NAG6 615 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 PPHLN1Q8NEY8 458 aaKnown RBP17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 WBP2Q969T9 261 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 PRICKLE1Q96MT3 831 aaPredicted RBP17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 TSSK1BQ9BXA7 367 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 BPTFQ12830 3046 aa17.59■□□□□ 0.41
PCDHGC3-205ENST00000617641 A0A0D9SEW6 157 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms