RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PIAS3Q9Y6X2 628 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 HIP1RO75146 1068 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 NDUFB10O96000 172 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 HEXBP07686 556 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MYBP10242 640 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SLFN5Q08AF3 891 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 PNOCQ13519 176 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ADCK5Q3MIX3 580 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 KCNV2Q8TDN2 545 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MRPL38Q96DV4 380 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 WDR83Q9BRX9 315 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 PCIF1Q9H4Z3 704 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 RNF121Q9H920 327 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 GNPTGQ9UJJ9 305 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TBL1XO60907 577 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 GJB5O95377 273 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 ATF2P15336 505 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 SCNN1GP51170 649 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 MAD2L1Q13257 205 aaPredicted RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 CNGA3Q16281 694 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 KCNT2Q6UVM3 1135 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 FERMT3Q86UX7 667 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 ADCY4Q8NFM4 1077 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 ST7LQ8TDW4 575 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 PI4K2AQ9BTU6 479 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 IP6K2Q9UHH9 426 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 O00370 1275 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 KRIT1O00522 736 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 CD52P31358 61 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 KCNMA1Q12791 1236 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 MAPRE2Q15555 327 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 DACT2Q5SW24 774 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 MRNIPQ6NTE8 343 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 GPBAR1Q8TDU6 330 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 MAP3K14Q99558 947 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 FAIM2Q9BWQ8 316 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 ARHGEF38Q9NXL2 777 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 NDRG3Q9UGV2 375 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 THADAQ6YHU6 1953 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 CFAP73A6NFT4 308 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 MGRN1O60291 552 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 DRD2P14416 443 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 MAGEA10P43363 369 aaPredicted RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 TERF1P54274 439 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 SIGLEC14Q08ET2 396 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 ABHD17BQ5VST6 288 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 TRIM65Q6PJ69 517 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 RHOT1Q8IXI2 618 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 NXPE1Q8N323 547 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 SLC22A8Q8TCC7 542 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 RAB39BQ96DA2 213 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 FBXL18Q96ME1 805 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 PGLYRP2Q96PD5 576 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 RC3H2Q9HBD1 1191 aaKnown RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 IL36AQ9UHA7 158 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 PCDHGA6Q9Y5G7 932 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 HELZP42694 1942 aaKnown RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 CEP192Q8TEP8 1941 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 CCR4P51679 360 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 DMPKQ09013 629 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 BLMHQ13867 455 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 DMC1Q14565 340 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 HABP4Q5JVS0 413 aaKnown RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 KIAA1161Q6NSJ0 714 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 CHST9Q7L1S5 443 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.4□□□□□ -1.86
LPP-220ENST00000617246 MR1Q95460 341 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 NOL6Q9H6R4 1146 aaKnown RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 ELAC1Q9H777 363 aaKnown RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 CLEC1BQ9P126 229 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 FTCDNL1E5RQL4 147 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 B4GAT1O43505 415 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 PCCBP05166 539 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 KRT8P05787 483 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 CD82P27701 267 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 OR1E1P30953 314 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 BUD31P41223 144 aaPredicted RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 IL10RAQ13651 578 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 ARHGAP40Q5TG30 622 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 RALGPS2Q86X27 583 aaPredicted RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 ZBED8Q8IZ13 594 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 SRFBP1Q8NEF9 429 aaKnown RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 RAB7BQ96AH8 199 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 TMA16Q96EY4 203 aaKnown RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 FERD3LQ96RJ6 166 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 UPB1Q9UBR1 384 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 EPHA6Q9UF33 1036 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 ZNF891A8MT65 544 aaPredicted RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 FAM227AF5H4B4 570 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 DLGAP3O95886 979 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 PLEKP08567 350 aaPredicted RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 SLC7A2P52569 658 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 TUSC3Q13454 348 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 LPAL2Q16609 132 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 TRIM61Q5EBN2 209 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 ZSCAN4Q8NAM6 433 aaPredicted RBP3.4□□□□□ -1.86
LPP-220ENST00000617246 VN1R2Q8NFZ6 395 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 TMEM40Q8WWA1 233 aa3.4□□□□□ -1.86
LPP-220ENST00000617246 HPDLQ96IR7 371 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms