RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 IGSF8Q969P0 613 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 SLC39A13Q96H72 371 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 TTPALQ9BTX7 342 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 FICDQ9BVA6 458 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 VPS11Q9H270 941 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 NOL6Q9H6R4 1146 aaKnown RBP15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 PREBQ9HCU5 417 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 TXNDC16Q9P2K2 825 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 DPPA5A6NC42 116 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 J3KR12 359 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 DHRS4L1P0CG22 281 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 ZNF135P52742 658 aaPredicted RBP15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 CES4AQ5XG92 561 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 GALNT15Q8N3T1 639 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 TSSK1BQ9BXA7 367 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 GALNT8Q9NY28 637 aa15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 IPO11Q9UI26 975 aaKnown RBP15.84■□□□□ 0.13
SEMA3B-212ENST00000616701 BPTFQ12830 3046 aa15.83■□□□□ 0.13
SEMA3B-212ENST00000616701 NYNRINQ9P2P1 1898 aaKnown RBP15.83■□□□□ 0.13
SEMA3B-212ENST00000616701 COL4A4P53420 1690 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 A0A0G2JND7 137 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 FGF10O15520 208 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 ITGA2BP08514 1039 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 HAPLN1P10915 354 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 CCNCP24863 283 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 ITKQ08881 620 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 GPR17Q13304 367 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 STRA8Q7Z7C7 330 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 KIF2BQ8N4N8 673 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 GRAMD1AQ96CP6 724 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 PABPC5Q96DU9 382 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 HMCESQ96FZ2 354 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 NACA2Q9H009 215 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 MYLK2Q9H1R3 596 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 ECT2Q9H8V3 914 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 CAB39LQ9H9S4 337 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 EBF2Q9HAK2 575 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 IARS2Q9NSE4 1012 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 C20orf96Q9NUD7 363 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 ZNF358Q9NW07 568 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 ZCWPW2A0A1B0GU75 182 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 HOXC13P31276 330 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 CHRNA4P43681 627 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 SERPINB9P50453 376 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 KCNQ1P51787 676 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 TRIM60Q495X7 471 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 ERP27Q96DN0 273 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 VAT1Q99536 393 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 GLOD4Q9HC38 313 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 CHKBQ9Y259 395 aa15.83■□□□□ 0.12
SEMA3B-212ENST00000616701 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 MATN3O15232 486 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 COL6A1P12109 1028 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 CCL5P13501 91 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 ATF6P18850 670 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 SAT1P21673 171 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 OR1D2P34982 312 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 ETFBP38117 255 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 MAGEA11P43364 429 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 TLE2Q04725 743 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 PDE1CQ14123 709 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 ARHGEF6Q15052 776 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 SPANXN3Q5MJ09 141 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 FBXL22Q6P050 247 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 TBC1D1Q86TI0 1168 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 SPNS2Q8IVW8 549 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 CFAP52Q8N1V2 620 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 FBXO22Q8NEZ5 403 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 C10orf82Q8WW14 230 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 MTBPQ96DY7 904 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 TLR8Q9NR97 1041 aaKnown RBP15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 SLC12A4Q9UP95 1085 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 CCNFP41002 786 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 DLG2Q15700 870 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 CHI3L2Q15782 390 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 SPOUT1Q5T280 376 aaKnown RBP15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 MSANTD2Q6P1R3 559 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 SLC25A41Q8N5S1 370 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 ACVR1CQ8NER5 493 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 NT5MQ9NPB1 228 aa15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 MARCOQ9UEW3 520 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-212ENST00000616701 TLR5O60602 858 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 KITP10721 976 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 TMPRSS15P98073 1019 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 RNF43Q68DV7 783 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 CCNJLQ8IV13 435 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 CRIPAKQ8N1N5 446 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 RPRD1AQ96P16 312 aaPredicted RBP15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 TBL1YQ9BQ87 522 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 NAT9Q9BTE0 207 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 CENPOQ9BU64 300 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 VN1R3Q9BXE9 311 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 RXFP1Q9HBX9 757 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 NUMBLQ9Y6R0 609 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 SCAMP3O14828 347 aaKnown RBP15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 GJB3O75712 270 aa15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 ALDH7A1P49419 539 aaKnown RBP15.81■□□□□ 0.12
SEMA3B-212ENST00000616701 CDH17Q12864 832 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms