RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 FAR2Q96K12 515 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 CDK5RAP1Q96SZ6 601 aaKnown RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 ADGRE3Q9BY15 652 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 GMIPQ9P107 970 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 CXorf49A8MYA2 514 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 PDE5AO76074 875 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 MT-CYBP00156 380 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 TKTP29401 623 aaKnown RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 MPP2Q14168 576 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 SLC9A4Q6AI14 798 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 TMEM40Q8WWA1 233 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 IRGQQ8WZA9 623 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 NCLNQ969V3 563 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 DCUN1D1Q96GG9 259 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 YME1L1Q96TA2 773 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 SSU72Q9NP77 194 aaKnown RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 SEPT3Q9UH03 358 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 TPBGLP0DKB5 382 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 TBL3Q12788 808 aaKnown RBP13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 PLD1Q13393 1074 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 CCDC142Q17RM4 750 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 TRMT5Q32P41 509 aaKnown RBP13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 LRRC49Q8IUZ0 686 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 DCAKDQ8WVC6 231 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 TXLNGYQ9BZA5 131 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 PNPOQ9NVS9 261 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 FETUBQ9UGM5 382 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 GPR32O75388 356 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 CCDC166P0CW27 439 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 BTG3Q14201 252 aaPredicted RBP13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 SGO1Q5FBB7 561 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 SPDYAQ5MJ70 313 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 TEDDM1Q5T9Z0 273 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 POTEHQ6S545 545 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 IGDCC3Q8IVU1 814 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 RNF148Q8N7C7 305 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 EXOC2Q96KP1 924 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 SIKE1Q9BRV8 207 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 NMUR2Q9GZQ4 415 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 MRGBPQ9NV56 204 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 ARL8BQ9NVJ2 186 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 Q9Y3F1 56 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 TEX264Q9Y6I9 313 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 PITX1P78337 314 aaPredicted RBP13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 USP4Q13107 963 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 UBAP2LQ14157 1087 aaKnown RBP13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 AGKQ53H12 422 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 ECM29Q5VYK3 1845 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 CFAP52Q8N1V2 620 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 GALNT4Q8N4A0 578 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 TRIML2Q8N7C3 387 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 AZIN2Q96A70 460 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 GBA3Q9H227 469 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 POMKQ9H5K3 350 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 CCDC134Q9H6E4 229 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 BATF3Q9NR55 127 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 SLC17A6Q9P2U8 582 aa13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 UXTQ9UBK9 157 aaPredicted RBP13.38□□□□□ -0.27
PPP4R3B-206ENST00000616407 HIST1H2AGP0C0S8 130 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 HIST1H2ADP20671 130 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 GRIA4P48058 902 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 PSEN1P49768 467 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 RPL14P50914 215 aaKnown RBP13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 EML3Q32P44 896 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 SNX30Q5VWJ9 437 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 BNC2Q6ZN30 1099 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 EME1Q96AY2 570 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 NAF1Q96HR8 494 aaKnown RBP13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 HIST1H2AHQ96KK5 128 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 HIST1H2AJQ99878 128 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 H2AFJQ9BTM1 129 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 SCN9AQ15858 1988 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 SKIV2L2P42285 1042 aaKnown RBP13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 SLC25A3Q00325 362 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 TCHHL1Q5QJ38 904 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 TMEM154Q6P9G4 183 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 LCA5Q86VQ0 697 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 SNX32Q86XE0 403 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 DENND1CQ8IV53 801 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 CXorf38Q8TB03 319 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 USP13Q92995 863 aaPredicted RBP13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 SMOQ99835 787 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 MRPL46Q9H2W6 279 aaKnown RBP13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 RNPEPL1Q9HAU8 725 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 XPR1Q9UBH6 696 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 FAM50BQ9Y247 325 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 E9PAM4 449 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 UBDO15205 165 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 ADCY6O43306 1168 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 ZMPSTE24O75844 475 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 OR1D2P34982 312 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 PRKAA2P54646 552 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 ARHGEF7Q14155 803 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 PPP1R15BQ5SWA1 713 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 HECTD3Q5T447 861 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 PKN3Q6P5Z2 889 aa13.37□□□□□ -0.27
PPP4R3B-206ENST00000616407 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms