RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 EIF3CQ99613 913 aaKnown RBP17.06■□□□□ 0.32
CBWD3-211ENST00000615061 OMDQ99983 421 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 TM6SF2Q9BZW4 377 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 SLC39A8Q9C0K1 460 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 ETNK2Q9NVF9 386 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 PPM1HQ9ULR3 514 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 HPCAL4Q9UM19 191 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 FAM47DPA6NHR8 397 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 SOWAHDA6NJG2 315 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 SEMA4FO95754 770 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 ADH1BP00325 375 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 CD48P09326 243 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 C5AR1P21730 350 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 YBEYP58557 167 aaPredicted RBP17.05■□□□□ 0.32
CBWD3-211ENST00000615061 SLC20A2Q08357 652 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 SERINC3Q13530 473 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 MESDQ14696 234 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 DCAF12L1Q5VU92 463 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 USP30Q70CQ3 517 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 POLNQ7Z5Q5 900 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 RGL4Q8IZJ4 473 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 PCDH18Q9HCL0 1135 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 FSCN3Q9NQT6 498 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 KLHL11Q9NVR0 708 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 SCML1Q9UN30 329 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 SLCO1B1Q9Y6L6 691 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 CACNA1AO00555 2505 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 BUB1O43683 1085 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 AMPD1P23109 780 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 GKP32189 559 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 CHRNA3P32297 505 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 PARP15Q460N3 678 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 ARHGAP12Q8IWW6 846 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 SPC24Q8NBT2 197 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 CADM4Q8NFZ8 388 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 OR6K2Q8NGY2 324 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 GRIN3AQ8TCU5 1115 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 TEKT4Q8WW24 435 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 FOXJ1Q92949 421 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 CSPG4P5Q96PW8 444 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 PANX2Q96RD6 677 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 NCKAP1Q9Y2A7 1128 aa17.05■□□□□ 0.32
CBWD3-211ENST00000615061 LNP1A1A4G5 178 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 METTL12A8MUP2 240 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 MEI4A8MW99 385 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 J3KR12 359 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 ALOX15BO15296 676 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 HCAR3P49019 387 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 PAPOLAP51003 745 aaKnown RBP17.04■□□□□ 0.32
CBWD3-211ENST00000615061 CDH6P55285 790 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 IRX4P78413 519 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 MMRN1Q13201 1228 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 TRIM61Q5EBN2 209 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-211ENST00000615061 ARHGAP36Q6ZRI8 547 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 DSG4Q86SJ6 1040 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
CBWD3-211ENST00000615061 C12orf50Q8NA57 414 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-211ENST00000615061 RFFLQ8WZ73 363 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 CEP44Q9C0F1 390 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 SGK2Q9HBY8 427 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 WASF2Q9Y6W5 498 aa17.04■□□□□ 0.32
CBWD3-211ENST00000615061 PLXNA2O75051 1894 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-211ENST00000615061 H3BRJ5 948 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 TMCC1O94876 653 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 LCA5LO95447 670 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 IL4RP24394 825 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 ARL4AP40617 200 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 MAGEA1P43355 309 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 RECQLP46063 649 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-211ENST00000615061 CCNHP51946 323 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-211ENST00000615061 NDST2P52849 883 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 LMNB2Q03252 620 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 CNTN1Q12860 1018 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 AASDHQ4L235 1098 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-211ENST00000615061 CARD16Q5EG05 197 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 ARSIQ5FYB1 569 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 PEAR1Q5VY43 1037 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-211ENST00000615061 AFMIDQ63HM1 303 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 NCEH1Q6PIU2 408 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 OR14C36Q8NHC7 312 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 SNX19Q92543 992 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 TSC1Q92574 1164 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 BIRC7Q96CA5 298 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 RMDN1Q96DB5 314 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 MIR1-1HGQ9H1L0 117 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 EIF2B4Q9UI10 523 aaKnown RBP17.03■□□□□ 0.32
CBWD3-211ENST00000615061 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-211ENST00000615061 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-211ENST00000615061 HYOU1Q9Y4L1 999 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 SPEGQ15772 3267 aa17.03■□□□□ 0.32
CBWD3-211ENST00000615061 DFFAO00273 331 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 KPNA3O00505 521 aaPredicted RBP17.02■□□□□ 0.32
CBWD3-211ENST00000615061 LEFTY1O75610 366 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 MTA2O94776 668 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 FSBPO95073 299 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 FECHP22830 423 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 ARSEP51690 589 aa17.02■□□□□ 0.32
CBWD3-211ENST00000615061 ADPRHP54922 357 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms