RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	ERN2	Q76MJ5	926 aa	Known RBP	11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	TFAP2D	Q7Z6R9	452 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	ABI3BP	Q7Z7G0	1075 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	ZSCAN30	Q86W11	494 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	ERICH1	Q86X53	443 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	PLPP6	Q8IY26	295 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	SLC25A45	Q8N413	288 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	MSANTD4	Q8NCY6	345 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	STK33	Q9BYT3	514 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	ZYG11B	Q9C0D3	744 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	GPR27	Q9NS67	375 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	DACH1	Q9UI36	760 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508	FHOD1	Q9Y613	1164 aa		11.38	□□□□□ -0.59
CBWD1-222	ENST00000613508		F8VZ95	297 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	TRIM38	O00635	465 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	AP1G1	O43747	822 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	THEGL	P0DJG4	465 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	ATXN8OS	P0DMR3	200 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	HNRNPA2B1	P22626	353 aa	Known RBP	11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	ITGB7	P26010	798 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	EEF1G	P26641	437 aa	Known RBP	11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	AKT2	P31751	481 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	SERPINH1	P50454	418 aa	Known RBP	11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	NOMO3	P69849	1222 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	E2F1	Q01094	437 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	RAPGEF1	Q13905	1077 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	ARSI	Q5FYB1	569 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	HES3	Q5TGS1	186 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	LINGO4	Q6UY18	593 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	DPY19L3	Q6ZPD9	716 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	NOP9	Q86U38	636 aa	Known RBP	11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	ZNF677	Q86XU0	584 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	DCP2	Q8IU60	420 aa	Known RBP	11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	PCDH20	Q8N6Y1	951 aa	Known RBP	11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	DCBLD1	Q8N8Z6	715 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	CHST14	Q8NCH0	376 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	OR4C6	Q8NH72	309 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	EPS8L1	Q8TE68	723 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	ISG20	Q96AZ6	181 aa	Known RBP	11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	ARRDC3	Q96B67	414 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	PPP1R16A	Q96I34	528 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	PDCL3	Q9H2J4	239 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	DYRK4	Q9NR20	520 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	MPP6	Q9NZW5	540 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	IL36A	Q9UHA7	158 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	ZFR2	Q9UPR6	939 aa	Known RBP	11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	SNX10	Q9Y5X0	201 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	WASF2	Q9Y6W5	498 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	CFAP46	Q8IYW2	2715 aa		11.37	□□□□□ -0.59
CBWD1-222	ENST00000613508	ATM	Q13315	3056 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	RNF103	O00237	685 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	SLC31A1	O15431	190 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	SIGLEC6	O43699	453 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	BNIP3L	O60238	219 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	PRLR	P16471	622 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	MMP8	P22894	467 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	GLDC	P23378	1020 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	DGKA	P23743	735 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	ETFB	P38117	255 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	RECQL	P46063	649 aa	Predicted RBP	11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	RPS21	P63220	83 aa	Known RBP	11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	ARF5	P84085	180 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	GNA12	Q03113	381 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	TCP11X2	Q5H9J9	407 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	MANEAL	Q5VSG8	457 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	KIAA1161	Q6NSJ0	714 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	OR7D4	Q8NG98	312 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	SNIP1	Q8TAD8	396 aa	Known RBP	11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	LRIG1	Q96JA1	1093 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	CFAP57	Q96MR6	1250 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	TMPRSS4	Q9NRS4	437 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	NOCT	Q9UK39	431 aa	Known RBP	11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	CA5B	Q9Y2D0	317 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	HS3ST3A1	Q9Y663	406 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	DOCK4	Q8N1I0	1966 aa		11.36	□□□□□ -0.59
CBWD1-222	ENST00000613508	MGA	Q8IWI9	3026 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508		A6NNZ2	444 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	RIOK3	O14730	519 aa	Known RBP	11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	SRGAP2	O75044	1071 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	SDC3	O75056	442 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	LEFTY1	O75610	366 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	CD160	O95971	181 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	MME	P08473	750 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	GIMD1	P0DJR0	217 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	CKMT1A	P12532	417 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	ADRB3	P13945	408 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	L1CAM	P32004	1257 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	ADRA1B	P35368	520 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	EIF2S3	P41091	472 aa	Known RBP	11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	MAPKAPK2	P49137	400 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	NEK3	P51956	506 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	CLDN6	P56747	220 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	GEMIN4	P57678	1058 aa	Known RBP	11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	INSM1	Q01101	510 aa	Predicted RBP	11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	C2CD6	Q53TS8	623 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	TAF3	Q5VWG9	929 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	NAA35	Q5VZE5	725 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms