RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 DDHD2O94830 711 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 APOEP02649 317 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 MAGEA3P43357 314 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 WASHC5Q12768 1159 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 BMPR2Q13873 1038 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 GK3PQ14409 553 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 MBTPS1Q14703 1052 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 TCHHL1Q5QJ38 904 aaPredicted RBP16.78■□□□□ 0.28
CNOT3-208ENST00000613073 TMCO4Q5TGY1 634 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 ZNF554Q86TJ5 538 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 SLC26A11Q86WA9 606 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 GAB3Q8WWW8 586 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 GLT1D1Q96MS3 346 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 PGLYRP2Q96PD5 576 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 SLC9A7Q96T83 725 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 EBNA1BP2Q99848 306 aaKnown RBP16.78■□□□□ 0.28
CNOT3-208ENST00000613073 SIKE1Q9BRV8 207 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 OR12D3Q9UGF7 316 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 PACSIN3Q9UKS6 424 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
CNOT3-208ENST00000613073 C9IYK1 514 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 M0QZQ0 153 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 CYP11A1P05108 521 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 PMLP29590 882 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 PGFP49763 221 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 TMPRSS15P98073 1019 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 PEX6Q13608 980 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 GRM2Q14416 872 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 PAFAH1B3Q15102 231 aaKnown RBP16.77■□□□□ 0.28
CNOT3-208ENST00000613073 ARL13BQ3SXY8 428 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 ANKRD20A4Q4UJ75 823 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 ZNF598Q86UK7 904 aaKnown RBP16.77■□□□□ 0.28
CNOT3-208ENST00000613073 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.77■□□□□ 0.28
CNOT3-208ENST00000613073 EBF4Q9BQW3 602 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 SIK2Q9H0K1 926 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 A0A088AWK7 358 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 TRIM49D1C9J1S8 452 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 CSH1P0DML2 217 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 CSH2P0DML3 217 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 SRGAP2BP0DMP2 458 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 RAG1P15918 1043 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 GRIK1P39086 918 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 YWHAHQ04917 246 aaPredicted RBP16.77■□□□□ 0.28
CNOT3-208ENST00000613073 TBL3Q12788 808 aaKnown RBP16.77■□□□□ 0.28
CNOT3-208ENST00000613073 TLR1Q15399 786 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 MYLK3Q32MK0 819 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 CDHR3Q6ZTQ4 885 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 THEM5Q8N1Q8 247 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 NTAN1Q96AB6 310 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 RMI1Q9H9A7 625 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 LIN28AQ9H9Z2 209 aaKnown RBP16.77■□□□□ 0.28
CNOT3-208ENST00000613073 PNPLA8Q9NP80 782 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 SLC17A6Q9P2U8 582 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 CIDEBQ9UHD4 219 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 LZTS1Q9Y250 596 aa16.77■□□□□ 0.28
CNOT3-208ENST00000613073 PRG3Q9Y2Y8 225 aaPredicted RBP16.77■□□□□ 0.28
CNOT3-208ENST00000613073 FKBP6O75344 327 aa16.77■□□□□ 0.27
CNOT3-208ENST00000613073 CAPN15O75808 1086 aa16.77■□□□□ 0.27
CNOT3-208ENST00000613073 GLUD2P49448 558 aa16.77■□□□□ 0.27
CNOT3-208ENST00000613073 TSPY1Q01534 308 aa16.77■□□□□ 0.27
CNOT3-208ENST00000613073 DNAL1Q4LDG9 190 aa16.77■□□□□ 0.27
CNOT3-208ENST00000613073 DCLRE1AQ6PJP8 1040 aa16.77■□□□□ 0.27
CNOT3-208ENST00000613073 RAET1EQ8TD07 263 aa16.77■□□□□ 0.27
CNOT3-208ENST00000613073 PKMYT1Q99640 499 aa16.77■□□□□ 0.27
CNOT3-208ENST00000613073 XAB2Q9HCS7 855 aaKnown RBP16.77■□□□□ 0.27
CNOT3-208ENST00000613073 KLHL8Q9P2G9 620 aaPredicted RBP16.77■□□□□ 0.27
CNOT3-208ENST00000613073 SRRDQ9UH36 339 aa16.77■□□□□ 0.27
CNOT3-208ENST00000613073 USP12O75317 370 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 MGAT1P26572 445 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 FDFT1P37268 417 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 RPL5P46777 297 aaKnown RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 OR1G1P47890 313 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 EMP3P54852 163 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 BST1Q10588 318 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 SEMA3BQ13214 749 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 NOGQ13253 232 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 SDHAF4Q5VUM1 108 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 PM20D1Q6GTS8 502 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 SPATA2LQ8IUW3 424 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 SCN4BQ8IWT1 228 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 ICA1LQ8NDH6 482 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 DQX1Q8TE96 717 aaKnown RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 CELF6Q96J87 481 aaKnown RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 SUSD3Q96L08 255 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 CNBD2Q96M20 576 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 FERMT1Q9BQL6 677 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 IQCGQ9H095 443 aaKnown RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 DSEQ9UL01 958 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 MAGED2Q9UNF1 606 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 LRIG2O94898 1065 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 PRKCHP24723 683 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 IRX4P78413 519 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 SCAPQ12770 1279 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 DCTN2Q13561 401 aaKnown RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 FAM26DQ5JW98 314 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 CLLU1OSQ5K130 101 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 RWDD4Q6NW29 188 aaKnown RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 KLHL35Q6PF15 583 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms