RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 PLEKHG6Q3KR16 790 aa17.87■□□□□ 0.45
SREK1-216ENST00000612404 ANKRD22Q5VYY1 191 aa17.87■□□□□ 0.45
SREK1-216ENST00000612404 TTC8Q8TAM2 541 aa17.87■□□□□ 0.45
SREK1-216ENST00000612404 GDAP1L1Q96MZ0 367 aa17.87■□□□□ 0.45
SREK1-216ENST00000612404 XPO6Q96QU8 1125 aaKnown RBP17.87■□□□□ 0.45
SREK1-216ENST00000612404 TRMT61BQ9BVS5 477 aaKnown RBP17.87■□□□□ 0.45
SREK1-216ENST00000612404 HPS4Q9NQG7 708 aa17.87■□□□□ 0.45
SREK1-216ENST00000612404 DNAJC17Q9NVM6 304 aaKnown RBP17.87■□□□□ 0.45
SREK1-216ENST00000612404 IGSF9Q9P2J2 1179 aa17.87■□□□□ 0.45
SREK1-216ENST00000612404 MTRF1LQ9UGC7 380 aaKnown RBP17.87■□□□□ 0.45
SREK1-216ENST00000612404 GGA2Q9UJY4 613 aa17.87■□□□□ 0.45
SREK1-216ENST00000612404 FARP1Q9Y4F1 1045 aaPredicted RBP17.87■□□□□ 0.45
SREK1-216ENST00000612404 TCRBV7S3A2A0A539 114 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 TRIM24O15164 1050 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 FAM153BP0C7A2 387 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 H2AFXP16104 143 aaPredicted RBP17.86■□□□□ 0.45
SREK1-216ENST00000612404 ARF5P84085 180 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 SLC12A1Q13621 1099 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 FAM153CQ494X1 144 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 SLC2A11Q9BYW1 496 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 FAM129AQ9BZQ8 928 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 FAM153AQ9UHL3 310 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 CACNG3O60359 315 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 ZMPSTE24O75844 475 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 PABPC1P11940 636 aaKnown RBP17.86■□□□□ 0.45
SREK1-216ENST00000612404 MAXP61244 160 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 NR1H3Q13133 447 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 HTR4Q13639 388 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 KCNJ11Q14654 390 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 PITRM1Q5JRX3 1037 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 BBS5Q8N3I7 341 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 CPA6Q8N4T0 437 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 TEX26Q8N6G2 289 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 NAT8LQ8N9F0 302 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.86■□□□□ 0.45
SREK1-216ENST00000612404 PRCCQ92733 491 aaPredicted RBP17.86■□□□□ 0.45
SREK1-216ENST00000612404 LMLNQ96KR4 655 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 GLOD4Q9HC38 313 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 GTSE1Q9NYZ3 720 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 INTS6Q9UL03 887 aaKnown RBP17.86■□□□□ 0.45
SREK1-216ENST00000612404 SHOC2Q9UQ13 582 aa17.86■□□□□ 0.45
SREK1-216ENST00000612404 C2CD4DB7Z1M9 353 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 CHADO15335 359 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 SEMA5AQ13591 1074 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 RUNX3Q13761 415 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 FUT11Q495W5 492 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 RETSATQ6NUM9 610 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 HOOK3Q86VS8 718 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 CCDC25Q86WR0 208 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 C12orf40Q86WS4 652 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 AENQ8WTP8 325 aaKnown RBP17.85■□□□□ 0.45
SREK1-216ENST00000612404 ANKRD7Q92527 254 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 EXOC4Q96A65 974 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 ACDQ96AP0 544 aa17.85■□□□□ 0.45
SREK1-216ENST00000612404 CINPQ9BW66 212 aaPredicted RBP17.85■□□□□ 0.45
SREK1-216ENST00000612404 KIF26AQ9ULI4 1882 aaPredicted RBP17.85■□□□□ 0.45
SREK1-216ENST00000612404 TMEM63AO94886 807 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 DGKGP49619 791 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 PLK1P53350 603 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 PRPSAP1Q14558 356 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 RFTN1Q14699 578 aaPredicted RBP17.84■□□□□ 0.45
SREK1-216ENST00000612404 PDCD7Q8N8D1 485 aaKnown RBP17.84■□□□□ 0.45
SREK1-216ENST00000612404 PWWP2AQ96N64 755 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 UBP1Q9NZI7 540 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 SEPT3Q9UH03 358 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 ATP8A1Q9Y2Q0 1164 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 ANHXE9PGG2 379 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 TULP3O75386 442 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 EMBQ6PCB8 327 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 PGBD5Q8N414 524 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 TSEN2Q8NCE0 465 aaKnown RBP17.84■□□□□ 0.45
SREK1-216ENST00000612404 SPATA22Q8NHS9 363 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 BRD9Q9H8M2 597 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 ARFGAP3Q9NP61 516 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 HAUS2Q9NVX0 235 aa17.84■□□□□ 0.45
SREK1-216ENST00000612404 TMCC1O94876 653 aa17.83■□□□□ 0.45
SREK1-216ENST00000612404 MT-CO1P00395 513 aa17.83■□□□□ 0.45
SREK1-216ENST00000612404 CTSOP43234 321 aaPredicted RBP17.83■□□□□ 0.45
SREK1-216ENST00000612404 TNNT3P45378 269 aaPredicted RBP17.83■□□□□ 0.45
SREK1-216ENST00000612404 AHI1Q8N157 1196 aa17.83■□□□□ 0.45
SREK1-216ENST00000612404 ZCCHC9Q8N567 271 aaKnown RBP17.83■□□□□ 0.45
SREK1-216ENST00000612404 HNRNPLLQ8WVV9 542 aaKnown RBP17.83■□□□□ 0.45
SREK1-216ENST00000612404 RPL10LQ96L21 214 aaKnown RBP17.83■□□□□ 0.45
SREK1-216ENST00000612404 GORASP1Q9BQQ3 440 aa17.83■□□□□ 0.45
SREK1-216ENST00000612404 PHF7Q9BWX1 381 aaPredicted RBP17.83■□□□□ 0.45
SREK1-216ENST00000612404 POLR1EQ9GZS1 481 aaKnown RBP17.83■□□□□ 0.45
SREK1-216ENST00000612404 FBXO10Q9UK96 956 aa17.83■□□□□ 0.45
SREK1-216ENST00000612404 TTC24A2A3L6 582 aaPredicted RBP17.83■□□□□ 0.44
SREK1-216ENST00000612404 SMAPO00193 183 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 MUSKO15146 869 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 CD160O95971 181 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 MAGEA6P43360 314 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 SLC6A11P48066 632 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 GEMIN4P57678 1058 aaKnown RBP17.83■□□□□ 0.44
SREK1-216ENST00000612404 DMC1Q14565 340 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 CYTH1Q15438 398 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 ETFBKMTQ8IXQ9 262 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 ATP11CQ8NB49 1132 aa17.83■□□□□ 0.44
SREK1-216ENST00000612404 OXNAD1Q96HP4 312 aaPredicted RBP17.83■□□□□ 0.44
SREK1-216ENST00000612404 FCRL5Q96RD9 977 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms