RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 H3BRJ5 948 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 MYO1FO00160 1098 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 BUB1O43683 1085 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 AKR1B10O60218 316 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 VAV1P15498 845 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 SSR1P43307 286 aaKnown RBP12.58□□□□□ -0.4
CBWD3-208ENST00000612050 GRIA4P48058 902 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 NOVA1P51513 510 aaKnown RBP12.58□□□□□ -0.4
CBWD3-208ENST00000612050 CCR5P51681 352 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 ADPRHP54922 357 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 SLC14A1Q13336 389 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 SUZ12Q15022 739 aaKnown RBP12.58□□□□□ -0.4
CBWD3-208ENST00000612050 BOLA3Q53S33 107 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 CARD16Q5EG05 197 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 PPP6R3Q5H9R7 873 aaPredicted RBP12.58□□□□□ -0.4
CBWD3-208ENST00000612050 E4F1Q66K89 784 aaPredicted RBP12.58□□□□□ -0.4
CBWD3-208ENST00000612050 NLRP14Q86W24 1093 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 CNGA4Q8IV77 575 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 GRIN3AQ8TCU5 1115 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 ISG20Q96AZ6 181 aaKnown RBP12.58□□□□□ -0.4
CBWD3-208ENST00000612050 LRIG1Q96JA1 1093 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 HEPHQ9BQS7 1158 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 TRIM5Q9C035 493 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 AASDHPPTQ9NRN7 309 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 ANAPC7Q9UJX3 599 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 PPM1HQ9ULR3 514 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 PCDHB9Q9Y5E1 797 aa12.58□□□□□ -0.4
CBWD3-208ENST00000612050 PI4KAP42356 2102 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 A0A1W2PPC4 97 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 FAM72CH0Y354 149 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 KDELR3O43731 214 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 DFNA5O60443 496 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 IGSF6O95976 241 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 MT-CO1P00395 513 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 H2AFZP0C0S5 128 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 MIPP30301 263 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 PCK1P35558 622 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 NDST2P52849 883 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 RACK1P63244 317 aaKnown RBP12.57□□□□□ -0.4
CBWD3-208ENST00000612050 GRIK2Q13002 908 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 INAVAQ3KP66 663 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 SETMARQ53H47 684 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-208ENST00000612050 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 CFAP58Q5T655 872 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 FAM72AQ5TYM5 149 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 HGSNATQ68CP4 663 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 FAM72DQ6L9T8 149 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 FBXL19Q6PCT2 694 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 H2AFVQ71UI9 128 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 FAM72BQ86X60 149 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 PLPP6Q8IY26 295 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 PYROXD2Q8N2H3 581 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 AADATQ8N5Z0 425 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 LZTR1Q8N653 840 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 PAF1Q8N7H5 531 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 OR2A12Q8NGT7 310 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 ARHGEF26Q96DR7 871 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 CCDC42Q96M95 316 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 GDAP1L1Q96MZ0 367 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 SNRNP25Q9BV90 132 aaKnown RBP12.57□□□□□ -0.4
CBWD3-208ENST00000612050 NUP85Q9BW27 656 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 OSBPL1AQ9BXW6 950 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 TNKS2Q9H2K2 1166 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 ZDHHC6Q9H6R6 413 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 PREBQ9HCU5 417 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 DMTF1Q9Y222 760 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 CFAP54Q96N23 3096 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 DMDP11532 3685 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 ZNF292O60281 2723 aa12.57□□□□□ -0.4
CBWD3-208ENST00000612050 A0A087X0T9 212 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 SSU72P8A0A1W2PR75 194 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 WASH4PA8MWX3 477 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 K7ERQ8 282 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 CDX4O14627 284 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-208ENST00000612050 PLRG1O43660 514 aaKnown RBP12.56□□□□□ -0.4
CBWD3-208ENST00000612050 FAM228BP0C875 321 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 CEACAM1P13688 526 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 CSRP1P21291 193 aaKnown RBP12.56□□□□□ -0.4
CBWD3-208ENST00000612050 GLDCP23378 1020 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 ACVRL1P37023 503 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 NEK3P51956 506 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 RHOAP61586 193 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 ARF5P84085 180 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 OGDHQ02218 1023 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 GRM3Q14832 879 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 SLC18A3Q16572 532 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 POM121L1PQ3SYA9 428 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 INO80DQ53TQ3 878 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-208ENST00000612050 ARSIQ5FYB1 569 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 ZFYVE27Q5T4F4 411 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 NEK5Q6P3R8 708 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 ZSCAN30Q86W11 494 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 OR2AP1Q8NGE2 309 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 SERAC1Q96JX3 654 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 TM6SF2Q9BZW4 377 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 THAP2Q9H0W7 228 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 SP110Q9HB58 689 aa12.56□□□□□ -0.4
CBWD3-208ENST00000612050 TM9SF3Q9HD45 589 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms