RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 ZDHHC13Q8IUH4 622 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 LRRC49Q8IUZ0 686 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 WDR60Q8WVS4 1066 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 FBXO44Q9H4M3 255 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CLK4Q9HAZ1 481 aaKnown RBP11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CSPG5O95196 566 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 FESP07332 822 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 VCLP18206 1134 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CYP2B6P20813 491 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 TBX4P57082 545 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 TNK2Q07912 1038 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 SLC25A52Q3SY17 297 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 NAT8LQ8N9F0 302 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CLEC4DQ8WXI8 215 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 TMCO1Q9UM00 188 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 ROBO1Q9Y6N7 1651 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 YDJCA8MPS7 323 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 POLD2P49005 469 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 RAB27AP51159 221 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 TOP3AQ13472 1001 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 PRKD1Q15139 912 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ACSBG2Q5FVE4 666 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 GNASQ5JWF2 1037 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 OVOS1Q6IE37 1185 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 CCDC103Q8IW40 242 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 KIAA0319LQ8IZA0 1049 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 B3GALNT2Q8NCR0 500 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 SH3KBP1Q96B97 665 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 TSPAN18Q96SJ8 248 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 KLHL25Q9H0H3 589 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ALG9Q9H6U8 611 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 TPRKBQ9Y3C4 175 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 C10orf71Q711Q0 1435 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 CD48P09326 243 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 IRF1P10914 325 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 SLC2A4P14672 509 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ETS2P15036 469 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ERCC2P18074 760 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 YY1P25490 414 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ADSLP30566 484 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 GDF10P55107 478 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ISLR2Q6UXK2 745 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 AADATQ8N5Z0 425 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 C12orf29Q8N999 325 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 CD101Q93033 1021 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ATXN3LQ9H3M9 355 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 PIF1Q9H611 641 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 TIMMDC1Q9NPL8 285 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 C8orf4Q9NR00 106 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ABCC13Q9NSE7 274 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 MAFBQ9Y5Q3 323 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 SLC12A8A0AV02 714 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 BBIP1A8MTZ0 92 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 RAD51BO15315 384 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 PLIN3O60664 434 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZNF682O95780 498 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 HOXC6P09630 235 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ATP6V1E1P36543 226 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 MRPS5P82675 430 aaKnown RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 MRPL28Q13084 256 aaKnown RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 PKN3Q6P5Z2 889 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 BBS7Q8IWZ6 715 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 C8orf59Q8N0T1 100 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 PGAM4Q8N0Y7 254 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 STAG3L4Q8TBR4 150 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 RORBQ92753 470 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 FBXL18Q96ME1 805 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 TRMOQ9BU70 441 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 BCAS3Q9H6U6 928 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ADARB2Q9NS39 739 aaKnown RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 KRT6AP02538 564 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 KRT6BP04259 564 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ECHS1P30084 290 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 KRT6CP48668 564 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 DGUOKQ16854 277 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZC3H12BQ5HYM0 836 aaKnown RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 POTEHQ6S545 545 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZNF276Q8N554 614 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 LRRN4Q8WUT4 740 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 DCAKDQ8WVC6 231 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 DNAJB3Q8WWF6 145 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 BORCS6Q96GS4 357 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 APOL4Q9BPW4 351 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 HMG20AQ9NP66 347 aa11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 TIMM13Q9Y5L4 95 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP3-206ENST00000611976 CAPN8A6NHC0 703 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 CASTOR2A6NHX0 329 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 HNRNPCL2B2RXH8 293 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 PEX1O43933 1283 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 VNN1O95497 513 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 C2P06681 752 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 PSMD5Q16401 504 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 TTC23Q5W5X9 447 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 EP400NLQ6ZTU2 488 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZCCHC7Q8N3Z6 543 aaKnown RBP11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 ACTRT2Q8TDY3 377 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 NAT14Q8WUY8 206 aa11.04□□□□□ -0.64
CDC42EP3-206ENST00000611976 ATAD3AQ9NVI7 634 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms