RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TRIM64CA6NLI5 447 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 TARM1B6A8C7 271 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 PSMD3O43242 534 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 SULT1E1P49888 294 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 KPNA2P52292 529 aaKnown RBP22.7■■□□□ 1.22
SHANK2-220ENST00000608988 DLG2Q15700 870 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 HSDL1Q3SXM5 330 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 KCTD21Q4G0X4 260 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 CHSY3Q70JA7 882 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 BNIPLQ7Z465 357 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 LSMEM2Q8N112 164 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 CRYBG2Q8N1P7 616 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 PELI3Q8N2H9 469 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 BBS5Q8N3I7 341 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 AFAP1L2Q8N4X5 818 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 PACRGLQ8N7B6 248 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 DNAAF3Q8N9W5 541 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 FNDC8Q8TC99 324 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 TRAPPC12Q8WVT3 735 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 PBXIP1Q96AQ6 731 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 ATXN7L3BQ96GX2 97 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 ZNF668Q96K58 619 aaPredicted RBP22.7■■□□□ 1.22
SHANK2-220ENST00000608988 ANKRD60Q9BZ19 345 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 GBA3Q9H227 469 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 HACL1Q9UJ83 578 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 ZNF510Q9Y2H8 683 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 PCDHGA7Q9Y5G6 932 aa22.7■■□□□ 1.22
SHANK2-220ENST00000608988 TCRBV3S1A0A5B6 114 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 HEATR9A2RTY3 570 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 DCLK1O15075 740 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 AMHP03971 560 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 SBK3P0C264 359 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 ARF4P18085 180 aaPredicted RBP22.69■■□□□ 1.22
SHANK2-220ENST00000608988 CYP2B6P20813 491 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 NAGLUP54802 743 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 DNAJB13P59910 316 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 COG7P83436 770 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 SQLEQ14534 574 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 POTEHQ6S545 545 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 HACD2Q6Y1H2 254 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 TRIM74Q86UV6 250 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 TRIM73Q86UV7 250 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 ANKFN1Q8N957 763 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 KDM1BQ8NB78 822 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 CLEC4CQ8WTT0 213 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 SCYL1Q96KG9 808 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 PLEKHG4BQ96PX9 1271 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 VAT1Q99536 393 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 COQ10BQ9H8M1 238 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 SLC39A10Q9ULF5 831 aa22.69■■□□□ 1.22
SHANK2-220ENST00000608988 C7orf72A4D263 438 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 TRIM24O15164 1050 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 CD1EP15812 388 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 MAGEA8P43361 318 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 PSMD5Q16401 504 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 KRT80Q6KB66 452 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 LRRC8EQ6NSJ5 796 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 PIWIL4Q7Z3Z4 852 aaKnown RBP22.68■■□□□ 1.22
SHANK2-220ENST00000608988 ZC3HC1Q86WB0 502 aaKnown RBP22.68■■□□□ 1.22
SHANK2-220ENST00000608988 FAM131BQ86XD5 332 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 LINC01465Q8N7H1 131 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 TMA16Q96EY4 203 aaKnown RBP22.68■■□□□ 1.22
SHANK2-220ENST00000608988 SPATA33Q96N06 139 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 FTHL17Q9BXU8 183 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 CLK4Q9HAZ1 481 aaKnown RBP22.68■■□□□ 1.22
SHANK2-220ENST00000608988 IARS2Q9NSE4 1012 aaKnown RBP22.68■■□□□ 1.22
SHANK2-220ENST00000608988 ADA2Q9NZK5 511 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 G3BP2Q9UN86 482 aaKnown RBP22.68■■□□□ 1.22
SHANK2-220ENST00000608988 RALGAPA2Q2PPJ7 1873 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 TK2O00142 265 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 ARIH2O95376 493 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 LCP1P13796 627 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 HCAR3P49019 387 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 GRM3Q14832 879 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 CYTH1Q15438 398 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 DCAF4L1Q3SXM0 396 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 NT5C3BQ969T7 300 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 ATP6V1E2Q96A05 226 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 CPB2Q96IY4 423 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 SLC9A7Q96T83 725 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 NPAS2Q99743 824 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 SNX25Q9H3E2 840 aa22.68■■□□□ 1.22
SHANK2-220ENST00000608988 RUVBL2Q9Y230 463 aaKnown RBP22.68■■□□□ 1.22
SHANK2-220ENST00000608988 A0A087WZ62 844 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 EEF2KO00418 725 aaKnown RBP22.67■■□□□ 1.22
SHANK2-220ENST00000608988 SDHDO14521 159 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 ESRRGP62508 458 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 USP10Q14694 798 aaKnown RBP22.67■■□□□ 1.22
SHANK2-220ENST00000608988 TMEM198Q66K66 360 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 TNIP2Q8NFZ5 429 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 OR6B3Q8NGW1 331 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 FDXACB1Q9BRP7 624 aaPredicted RBP22.67■■□□□ 1.22
SHANK2-220ENST00000608988 TMEM79Q9BSE2 394 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 STAP1Q9ULZ2 295 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 ACOT9Q9Y305 439 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 WDR90Q96KV7 1748 aa22.67■■□□□ 1.22
SHANK2-220ENST00000608988 STX16-NPEPL1H3BU86 382 aa22.66■■□□□ 1.22
SHANK2-220ENST00000608988 STAMBPO95630 424 aa22.66■■□□□ 1.22
SHANK2-220ENST00000608988 NOS2P35228 1153 aa22.66■■□□□ 1.22
SHANK2-220ENST00000608988 GLRA4Q5JXX5 417 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms