RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 GTSE1Q9NYZ3 720 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-221ENST00000608903 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-221ENST00000608903 GOLGA6BA6NDN3 693 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 ANTXRLA6NF34 631 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 ECI2O75521 394 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 CYBBP04839 570 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 ADH5P11766 374 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 PSMB4P28070 264 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 ETFBP38117 255 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 CTSOP43234 321 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-221ENST00000608903 PLTPP55058 493 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 CYTH1Q15438 398 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 FUT11Q495W5 492 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 HIBCHQ6NVY1 386 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-221ENST00000608903 ZNF783Q6ZMS7 281 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 PID1Q7Z2X4 250 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 KIAA0907Q7Z7F0 614 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-221ENST00000608903 ZNF354CQ86Y25 554 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 SFTPA1Q8IWL2 248 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 ETFBKMTQ8IXQ9 262 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 FATE1Q969F0 183 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 SNF8Q96H20 258 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 ACBD3Q9H3P7 528 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 SP110Q9HB58 689 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 MED4Q9NPJ6 270 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 RBM22Q9NW64 420 aaKnown RBP eCLIP11.78□□□□□ -0.52
CTCFL-221ENST00000608903 WHRNQ9P202 907 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 PAK5Q9P286 719 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 VPS51Q9UID3 782 aa11.78□□□□□ -0.52
CTCFL-221ENST00000608903 TYW5A2RUC4 315 aaKnown RBP11.77□□□□□ -0.52
CTCFL-221ENST00000608903 K7ERQ8 282 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 CBX4O00257 560 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 HOXC11O43248 304 aaPredicted RBP11.77□□□□□ -0.52
CTCFL-221ENST00000608903 CACNG3O60359 315 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 RNF40O75150 1001 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 TMEM63AO94886 807 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 PSMC3P17980 439 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 NFKB1P19838 968 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 RGRP47804 291 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 PLK1P53350 603 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 OXCT1P55809 520 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 NIPAL4Q0D2K0 466 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 OLIG2Q13516 323 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 KCNJ11Q14654 390 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 PLEKHG6Q3KR16 790 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 ADIPOR2Q86V24 386 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.77□□□□□ -0.52
CTCFL-221ENST00000608903 NAT8LQ8N9F0 302 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 MLPHQ9BV36 600 aaPredicted RBP11.77□□□□□ -0.52
CTCFL-221ENST00000608903 RAB6BQ9NRW1 208 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 FAM114A2Q9NRY5 505 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 KIAA1522Q9P206 1035 aaPredicted RBP11.77□□□□□ -0.52
CTCFL-221ENST00000608903 TPX2Q9ULW0 747 aaKnown RBP11.77□□□□□ -0.52
CTCFL-221ENST00000608903 ATP8A1Q9Y2Q0 1164 aa11.77□□□□□ -0.52
CTCFL-221ENST00000608903 MIA3Q5JRA6 1907 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 MYO10Q9HD67 2058 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 OPHN1O60890 802 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 ITIH2P19823 946 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 GDI1P31150 447 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 GRIA1P42261 906 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 MAXP61244 160 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 TFF2Q03403 129 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 CUL1Q13616 776 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 HNRNPDQ14103 355 aaKnown RBP11.77□□□□□ -0.53
CTCFL-221ENST00000608903 HLTFQ14527 1009 aaKnown RBP eCLIP11.77□□□□□ -0.53
CTCFL-221ENST00000608903 GEN1Q17RS7 908 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 AAK1Q2M2I8 961 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 HSP90B2PQ58FF3 399 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 PITRM1Q5JRX3 1037 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 UBAP2Q5T6F2 1119 aaKnown RBP11.77□□□□□ -0.53
CTCFL-221ENST00000608903 TIGD7Q6NT04 549 aaPredicted RBP11.77□□□□□ -0.53
CTCFL-221ENST00000608903 IQCKQ8N0W5 287 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 MREGQ8N565 214 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 SPATA22Q8NHS9 363 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 PRCCQ92733 491 aaPredicted RBP11.77□□□□□ -0.53
CTCFL-221ENST00000608903 HLA-CQ95604 372 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 E2F7Q96AV8 911 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 OXNAD1Q96HP4 312 aaPredicted RBP11.77□□□□□ -0.53
CTCFL-221ENST00000608903 ZIM3Q96PE6 472 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 KLHL8Q9P2G9 620 aaPredicted RBP11.77□□□□□ -0.53
CTCFL-221ENST00000608903 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 VPS28Q9UK41 221 aa11.77□□□□□ -0.53
CTCFL-221ENST00000608903 SMAD6O43541 496 aaKnown RBP11.76□□□□□ -0.53
CTCFL-221ENST00000608903 TULP3O75386 442 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 IVLP07476 585 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 OPRD1P41143 372 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 RUNX3Q13761 415 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 LBRQ14739 615 aaKnown RBP11.76□□□□□ -0.53
CTCFL-221ENST00000608903 PDGFRLQ15198 375 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 IER5LQ5T953 404 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 ARHGEF18Q6ZSZ5 1173 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 SRLQ86TD4 932 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 PHTF2Q8N3S3 785 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.76□□□□□ -0.53
CTCFL-221ENST00000608903 EIF1ADQ8N9N8 165 aaKnown RBP11.76□□□□□ -0.53
CTCFL-221ENST00000608903 DCAF4L2Q8NA75 395 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 ARRDC2Q8TBH0 407 aa11.76□□□□□ -0.53
CTCFL-221ENST00000608903 SH3GL2Q99962 352 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms