RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ZYG11BQ9C0D3 744 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 RAB6CQ9H0N0 254 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 VPS16Q9H269 839 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 TNKS2Q9H2K2 1166 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 PPARGC1AQ9UBK2 798 aaKnown RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 OR12D3Q9UGF7 316 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 IL36AQ9UHA7 158 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 NOCTQ9UK39 431 aaKnown RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 LHX6Q9UPM6 363 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CA5BQ9Y2D0 317 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 A0A1W2PQU0 124 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 EPHB6O15197 1021 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 LEFTY1O75610 366 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 PCDH8O95206 1070 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 CD160O95971 181 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 CDK4P11802 303 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 UNGP13051 313 aaPredicted RBP7.78□□□□□ -1.16
CUX1-219ENST00000606749 JUPP14923 745 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 PRLRP16471 622 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 MMP8P22894 467 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 SOX5P35711 763 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 RECQLP46063 649 aaPredicted RBP7.78□□□□□ -1.16
CUX1-219ENST00000606749 ACADVLP49748 655 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 JAM2P57087 298 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 ARF5P84085 180 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 FMO1Q01740 532 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 NRG1Q02297 640 aaPredicted RBP7.78□□□□□ -1.16
CUX1-219ENST00000606749 GNA12Q03113 381 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 C15orf59Q2T9L4 293 aaPredicted RBP7.78□□□□□ -1.16
CUX1-219ENST00000606749 CARD16Q5EG05 197 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 CDKAL1Q5VV42 579 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 RETSATQ6NUM9 610 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 C22orf39Q6P5X5 142 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 DRC7Q8IY82 874 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 SLC25A45Q8N413 288 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 GRIN3AQ8TCU5 1115 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 GPT2Q8TD30 523 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 RXFP2Q8WXD0 754 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 CENPIQ92674 756 aaPredicted RBP7.78□□□□□ -1.16
CUX1-219ENST00000606749 PCDHB18PQ96TA0 734 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 HEPHQ9BQS7 1158 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 MAGEB5Q9BZ81 275 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 CEP44Q9C0F1 390 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 OSBPL2Q9H1P3 480 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 RETREG1Q9H6L5 497 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 ATP13A1Q9HD20 1204 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 NLRC4Q9NPP4 1024 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 DYRK4Q9NR20 520 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 METTL5Q9NRN9 209 aaKnown RBP7.78□□□□□ -1.16
CUX1-219ENST00000606749 FAM207AQ9NSI2 230 aaPredicted RBP7.78□□□□□ -1.16
CUX1-219ENST00000606749 FANCLQ9NW38 375 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 ZFR2Q9UPR6 939 aaKnown RBP7.78□□□□□ -1.16
CUX1-219ENST00000606749 SIK3Q9Y2K2 1263 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 RAXQ9Y2V3 346 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 ACTL7AQ9Y615 435 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 WASF2Q9Y6W5 498 aa7.78□□□□□ -1.16
CUX1-219ENST00000606749 CHD6Q8TD26 2715 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 KNTC1P50748 2209 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 GOLGA4Q13439 2230 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 CXorf51AA0A1B0GTR3 108 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 LRRC10BA6NIK2 292 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 C2CD4BA6NLJ0 364 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 FAM72CH0Y354 149 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 TRIM38O00635 465 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 SDC3O75056 442 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 RFPL3O75679 317 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 GJB6O95452 261 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 TPM2P07951 284 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 PLEKP08567 350 aaPredicted RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 THEGLP0DJG4 465 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 KRT3P12035 628 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 HOXB3P14651 431 aaPredicted RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 CKMT2P17540 419 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 HNRNPA2B1P22626 353 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 DGKAP23743 735 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 SDC4P31431 198 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 AKT2P31751 481 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 L1CAMP32004 1257 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 ACVRL1P37023 503 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 STAT1P42224 750 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 SERPINH1P50454 418 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 DNA2P51530 1060 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 CLDN6P56747 220 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 CLDN2P57739 230 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 PTP4A2Q12974 167 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 FGL2Q14314 439 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 CDO1Q16878 200 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 ARL13BQ3SXY8 428 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 TMEM259Q4ZIN3 620 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 FKBP15Q5T1M5 1219 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 FAM72AQ5TYM5 149 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 MANEALQ5VSG8 457 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 SEL1L3Q68CR1 1132 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 FAM72DQ6L9T8 149 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 RWDD4Q6NW29 188 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 FBXL19Q6PCT2 694 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 TRIM72Q6ZMU5 477 aa7.77□□□□□ -1.17
CUX1-219ENST00000606749 RBM43Q6ZSC3 357 aaKnown RBP7.77□□□□□ -1.17
CUX1-219ENST00000606749 STRADAQ7RTN6 431 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms