RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 EPB41P11171 864 aaKnown RBP15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 KRT83P78385 493 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 STILQ15468 1287 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 TMEM259Q4ZIN3 620 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PRRT3Q5FWE3 981 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 RESP18Q5W5W9 173 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CXorf57Q6NSI4 855 aaKnown RBP15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 TMEM270Q6UE05 265 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SLC35F3Q8IY50 421 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 RPRD1AQ96P16 312 aaPredicted RBP15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 MUC3BQ9H195 1237 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.75■□□□□ 0.112e-6■■■■■ 42.9
NEDD8-MDP1-204ENST00000605847 KLF15Q9UIH9 416 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PADI4Q9UM07 663 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 MAPK8IP1Q9UQF2 711 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PAXBP1Q9Y5B6 917 aa15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 TDRD6O60522 2096 aaKnown RBP15.75■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 COL27A1Q8IZC6 1860 aaPredicted RBP15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PAEPP09466 180 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SRCP12931 536 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 HGFP14210 728 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 TBXAS1P24557 533 aaPredicted RBP15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 NOS2P35228 1153 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 RECQLP46063 649 aaPredicted RBP15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 ADKP55263 362 aaKnown RBP15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SGCGQ13326 291 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PTK2BQ14289 1009 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CNGA2Q16280 664 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SYPL2Q5VXT5 272 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 VASH2Q86V25 355 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PTRH1Q86Y79 214 aaKnown RBP15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 OR2A12Q8NGT7 310 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 GRIN3AQ8TCU5 1115 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 TFAP2BQ92481 460 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PPP1R13BQ96KQ4 1090 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 HDAC8Q9BY41 377 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PISDQ9UG56 409 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PCDHA7Q9UN72 937 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 DOLKQ9UPQ8 538 aa15.74■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 NTN3O00634 580 aaPredicted RBP15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CASC3O15234 703 aaKnown RBP15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 NVLO15381 856 aaKnown RBP15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 ACTN4O43707 911 aaKnown RBP15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 TRUB2O95900 331 aaKnown RBP15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 MYL1P05976 194 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SLC2A3P11169 496 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 NEK3P51956 506 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 THOP1P52888 689 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CYP4F2P78329 520 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 LRMPQ12912 555 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 C1orf61Q13536 156 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 ARSIQ5FYB1 569 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 DCAF17Q5H9S7 520 aaPredicted RBP15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 B3GNT8Q7Z7M8 397 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 RBFAQ8N0V3 343 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 ALG14Q96F25 216 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 TMEM74Q96NL1 305 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PRMT1Q99873 361 aaKnown RBP15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 FOXP3Q9BZS1 431 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SLC13A1Q9BZW2 595 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 EPN3Q9H201 632 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 ADNPQ9H2P0 1102 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 GULP1Q9UBP9 304 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 IL36AQ9UHA7 158 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 DACH1Q9UI36 760 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 HS3ST2Q9Y278 367 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 MAN2B2Q9Y2E5 1009 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PCDHB4Q9Y5E5 795 aa15.73■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 DOCK9Q9BZ29 2069 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 D6RAR5 112 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 LMO7DNF2Z398 122 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 RAD51BO15315 384 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 GCATO75600 419 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 BRD2P25440 801 aaKnown RBP15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CENPCQ03188 943 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 MORC3Q14149 939 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SKIDA1Q1XH10 827 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 FOXD4L6Q3SYB3 417 aaPredicted RBP15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CBWD6Q4V339 395 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CBWD3Q5JTY5 395 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CBWD5Q5RIA9 395 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 FBXL22Q6P050 247 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 FOXD4L3Q6VB84 417 aaPredicted RBP15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 BEND5Q7L4P6 421 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 ZSCAN30Q86W11 494 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 PHACTR4Q8IZ21 702 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 ZNF564Q8TBZ8 553 aaPredicted RBP15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SCG3Q8WXD2 468 aaKnown RBP15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 C2orf49Q9BVC5 232 aaPredicted RBP15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 POPDC2Q9HBU9 364 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 FOXD4L1Q9NU39 408 aa15.72■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SYNJ2BP-COX16A0A087WUM0 186 aa15.71■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 M0QYT0 321 aa15.71■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CETN3O15182 167 aa15.71■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 SPINT1O43278 529 aa15.71■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 CLDN11O75508 207 aa15.71■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 LEFTY1O75610 366 aa15.71■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 MT-CO1P00395 513 aa15.71■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 ADRB3P13945 408 aa15.71■□□□□ 0.11
NEDD8-MDP1-204ENST00000605847 RRM1P23921 792 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms