RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 VANGL2Q9ULK5 521 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 RNF112Q9ULX5 631 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 MAN2B2Q9Y2E5 1009 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 KCNK7Q9Y2U2 307 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 MROH7Q68CQ1 1323 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 MROH5Q6ZUA9 1318 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TTC21AQ8NDW8 1320 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 SSH2Q76I76 1423 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 LY75O60449 1722 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 MACROD2A1Z1Q3 448 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 GMNCA6NCL1 334 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 FAM47DPA6NHR8 397 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 OR6C65A6NJZ3 312 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 CCT8L1PA6NM43 557 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 HGSO14964 777 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TGM5O43548 720 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 GMFGO60234 142 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 CCNT1O60563 726 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ADAM23O75077 832 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 MPOP05164 745 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 MAPTP10636 758 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 EDN3P14138 238 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 CYP2A7P20853 494 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 KCNA3P22001 575 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 NR2F2P24468 414 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 GJB2P29033 226 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 HSPA9P38646 679 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 AGFG1P52594 562 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 GUCY2DQ02846 1103 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 CDK18Q07002 472 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 R3HDM1Q15032 1099 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 POLD3Q15054 466 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 STILQ15468 1287 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 MOGQ16653 247 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 FBXO43Q4G163 708 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 LIN52Q52LA3 116 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TTMPQ5BVD1 217 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 KCNT2Q6UVM3 1135 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 DSG4Q86SJ6 1040 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 CDH24Q86UP0 819 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 METTL23Q86XA0 190 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 DHX40Q8IX18 779 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC43A2Q8N370 569 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 DPP10Q8N608 796 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ARFGAP2Q8N6H7 521 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 OR52M1Q8NGK5 317 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 DNAJC9Q8WXX5 260 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TNFRSF25Q93038 417 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 PERPQ96FX8 193 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 DHRS9Q9BPW9 319 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 BTBD2Q9BX70 525 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 API5Q9BZZ5 524 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 EPB41L1Q9H4G0 881 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TAF1DQ9H5J8 278 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 MAGEE1Q9HCI5 957 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TMEM39AQ9NV64 488 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ARMC1Q9NVT9 282 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ZDHHC7Q9NXF8 308 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 USH1CQ9Y6N9 552 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 PDS5AQ29RF7 1337 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TNS2Q63HR2 1409 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ZNF831Q5JPB2 1677 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 A0A1W2PP55 124 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SYCE1LA8MT33 242 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 H0YIV9 168 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SYT5O00445 386 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PODXLO00592 558 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 SMAD9O15198 467 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TGFB1I1O43294 461 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 DLX3O60479 287 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 CYTIPO60759 359 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TJP3O95049 919 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 IL1AP01583 271 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 KRT6AP02538 564 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 F11P03951 625 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 KRT6BP04259 564 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 GNAI2P04899 355 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ENO2P09104 434 aaPredicted RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PABPC4LP0CB38 370 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PLCG1P19174 1290 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TYMPP19971 482 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 GNA11P29992 359 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PHBP35232 272 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TMPOP42166 694 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 GRIA4P48058 902 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 KRT6CP48668 564 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 MTHFSP49914 203 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 RAB1AP62820 205 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 FAAP100Q0VG06 881 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 PPIL2Q13356 520 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ITIH4Q14624 930 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 LPIN1Q14693 890 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 NCAPHQ15003 741 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 EZH2Q15910 746 aaKnown RBP5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 DPYSL2Q16555 572 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 DGKDQ16760 1214 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 KLHL38Q2WGJ6 581 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 ZCWPW2Q504Y3 356 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 NHSL2Q5HYW2 709 aa5.11□□□□□ -1.59
SPTBN1-206ENST00000602898 TOR2AQ5JU69 321 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms