RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 METAP1P53582 386 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 DAB2P98082 770 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 ZNF284Q2VY69 593 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 KIAA1161Q6NSJ0 714 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 SLC47A2Q86VL8 602 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 ERICH1Q86X53 443 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 IRF2BP1Q8IU81 584 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 ZNF683Q8IZ20 524 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 SLC25A45Q8N413 288 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 PSMB7Q99436 277 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 IL36AQ9UHA7 158 aa18.22■□□□□ 0.51
SHKBP1-227ENST00000602011 PTPRQQ9UMZ3 2332 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 SIGLEC6O43699 453 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 KALRNO60229 2985 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 CNTN5O94779 1100 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 PCDH8O95206 1070 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 LSM8O95777 96 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 MT-CO1P00395 513 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 CKMT1AP12532 417 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 SULT1E1P49888 294 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 RNASE9P60153 205 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 HNRNPKP61978 463 aaKnown RBP eCLIP18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 UBE2HP62256 183 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 RPS21P63220 83 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 ABI3BPQ7Z7G0 1075 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 PCDH20Q8N6Y1 951 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 FAM181AQ8N9Y4 354 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 GRAMD1AQ96CP6 724 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 NDST4Q9H3R1 872 aa18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 PPARGC1AQ9UBK2 798 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-227ENST00000602011 MYLKQ15746 1914 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 AP1G1O43747 822 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 GADD45BO75293 160 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 MT-CO3P00414 261 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 CTSLP07711 333 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 IRAK1P51617 712 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 NEK3P51956 506 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 GEMIN4P57678 1058 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 INSM1Q01101 510 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 VWA3BQ502W6 1294 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 ALFQ53S48 1182 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 ARSIQ5FYB1 569 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 CT47A1Q5JQC4 288 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 ASB12Q8WXK4 309 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 SLC39A7Q92504 469 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 RAB7BQ96AH8 199 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 ISG20Q96AZ6 181 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 HEPHQ9BQS7 1158 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 PRORYQ9H606 182 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 SIX2Q9NPC8 291 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 NLGN3Q9NZ94 848 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 DACH1Q9UI36 760 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 CSNK1G3Q9Y6M4 447 aa18.2■□□□□ 0.5
SHKBP1-227ENST00000602011 CAPN8A6NHC0 703 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 A6NNZ2 444 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 TRIM38O00635 465 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 SCAMP1O15126 338 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 SNAP91O60641 907 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 PIAS2O75928 621 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 CYP11B1P15538 503 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 ITGB7P26010 798 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 ERCC5P28715 1186 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 L1CAMP32004 1257 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 ARL13BQ3SXY8 428 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 POM121L1PQ3SYA9 428 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 TMEM259Q4ZIN3 620 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 FAM102AQ5T9C2 384 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 C22orf39Q6P5X5 142 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 ARRDC3Q96B67 414 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 ZNF578Q96N58 590 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 LENG8Q96PV6 779 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 SLC17A9Q9BYT1 436 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 ZYG11BQ9C0D3 744 aa18.19■□□□□ 0.5
SHKBP1-227ENST00000602011 A0A0D9SEW6 157 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 TSPAN6O43657 245 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 LEFTY1O75610 366 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 ENDOD1O94919 500 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 RRM1P23921 792 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 RABIFP47224 123 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 SERPINH1P50454 418 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 C19orf57Q0VDD7 668 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 DRAP1Q14919 205 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 CARD16Q5EG05 197 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 OTUD1Q5VV17 481 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 DPY19L3Q6ZPD9 716 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 Q6ZSR6 202 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 ZNF677Q86XU0 584 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 TPCN2Q8NHX9 752 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 ARHGEF26Q96DR7 871 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 DEPDC7Q96QD5 511 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 TBCBQ99426 244 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 TUBGCP2Q9BSJ2 902 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 SPON2Q9BUD6 331 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 CALN1Q9BXU9 219 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 CAAP1Q9H8G2 361 aa18.18■□□□□ 0.5
SHKBP1-227ENST00000602011 TEX51A0A1B0GUA7 166 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 H3BM21 787 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 K7ERQ8 282 aa18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 SMAD6O43541 496 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-227ENST00000602011 SRGAP2O75044 1071 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms