RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CHD5Q8TDI0 1954 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 TCRBV7S3A2A0A539 114 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 ERI2A8K979 691 aaKnown RBP22.98■■□□□ 1.27
IRF3-228ENST00000601291 GOLGA8MH3BSY2 632 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 HOXC11O43248 304 aaPredicted RBP22.98■■□□□ 1.27
IRF3-228ENST00000601291 ECI2O75521 394 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 CD70P32970 193 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 PLK1P53350 603 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 ARL4CP56559 192 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 DHX9Q08211 1270 aaKnown RBP22.98■■□□□ 1.27
IRF3-228ENST00000601291 SKIV2LQ15477 1246 aaKnown RBP22.98■■□□□ 1.27
IRF3-228ENST00000601291 PLEKHG6Q3KR16 790 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 SYCP2LQ5T4T6 812 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 RETSATQ6NUM9 610 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 TMC3Q7Z5M5 1100 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 ZNF419Q96HQ0 510 aaPredicted RBP22.98■■□□□ 1.27
IRF3-228ENST00000601291 CDX2Q99626 313 aaPredicted RBP22.98■■□□□ 1.27
IRF3-228ENST00000601291 KXD1Q9BQD3 176 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 FAM83CQ9BQN1 747 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 CINPQ9BW66 212 aaPredicted RBP22.98■■□□□ 1.27
IRF3-228ENST00000601291 EBF3Q9H4W6 596 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 UBE2ZQ9H832 354 aaPredicted RBP22.98■■□□□ 1.27
IRF3-228ENST00000601291 VPS51Q9UID3 782 aa22.98■■□□□ 1.27
IRF3-228ENST00000601291 AAR2Q9Y312 384 aaKnown RBP22.98■■□□□ 1.27
IRF3-228ENST00000601291 PSMD3O43242 534 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 CACNG3O60359 315 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 SNAP91O60641 907 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 ANXA9O76027 345 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 PSMC3P17980 439 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 HLA-FP30511 346 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 ARF5P84085 180 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 ITKQ08881 620 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 CCDC85BQ15834 202 aaPredicted RBP22.97■■□□□ 1.27
IRF3-228ENST00000601291 HIF1AQ16665 826 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 CENPUQ71F23 418 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 APCDD1Q8J025 514 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 PDCD7Q8N8D1 485 aaKnown RBP22.97■■□□□ 1.27
IRF3-228ENST00000601291 MCUQ8NE86 351 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 ZFYVE19Q96K21 471 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 PHACTR1Q9C0D0 580 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 POLR1EQ9GZS1 481 aaKnown RBP22.97■■□□□ 1.27
IRF3-228ENST00000601291 EPS15L1Q9UBC2 864 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 GGA2Q9UJY4 613 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 ZMPSTE24O75844 475 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 ARSAP15289 507 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 FOSL2P15408 326 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 KCNA5P22460 613 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 NR1H3Q13133 447 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 SMAD4Q13485 552 aaKnown RBP22.97■■□□□ 1.27
IRF3-228ENST00000601291 DMC1Q14565 340 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 PITRM1Q5JRX3 1037 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 PARM1Q6UWI2 310 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 PDIK1LQ8N165 341 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 CPA6Q8N4T0 437 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 ST13P5Q8NFI4 369 aaPredicted RBP22.97■■□□□ 1.27
IRF3-228ENST00000601291 LMLNQ96KR4 655 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 RBM15Q96T37 977 aaKnown RBP eCLIP22.97■■□□□ 1.27
IRF3-228ENST00000601291 SLC25A51Q9H1U9 297 aa22.97■■□□□ 1.27
IRF3-228ENST00000601291 CXorf51AA0A1B0GTR3 108 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 PPFIA2O75334 1257 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 PABPC1P11940 636 aaKnown RBP22.96■■□□□ 1.27
IRF3-228ENST00000601291 HSPA9P38646 679 aaKnown RBP22.96■■□□□ 1.27
IRF3-228ENST00000601291 GEMP55040 296 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 GRM2Q14416 872 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 INO80DQ53TQ3 878 aaPredicted RBP22.96■■□□□ 1.27
IRF3-228ENST00000601291 Q7L0L9 218 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 METTL3Q86U44 580 aaKnown RBP22.96■■□□□ 1.27
IRF3-228ENST00000601291 MREGQ8N565 214 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 FGF14Q92915 247 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 PSKH2Q96QS6 385 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 GORASP1Q9BQQ3 440 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 ECT2Q9H8V3 914 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 LRRC40Q9H9A6 602 aa22.96■■□□□ 1.27
IRF3-228ENST00000601291 AP2A1O95782 977 aa22.95■■□□□ 1.26
IRF3-228ENST00000601291 LINGO4Q6UY18 593 aa22.95■■□□□ 1.26
IRF3-228ENST00000601291 HDXQ7Z353 690 aa22.95■■□□□ 1.26
IRF3-228ENST00000601291 AHI1Q8N157 1196 aa22.95■■□□□ 1.26
IRF3-228ENST00000601291 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.95■■□□□ 1.26
IRF3-228ENST00000601291 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.95■■□□□ 1.26
IRF3-228ENST00000601291 NAT16Q8N8M0 369 aa22.95■■□□□ 1.26
IRF3-228ENST00000601291 PWWP2AQ96N64 755 aa22.95■■□□□ 1.26
IRF3-228ENST00000601291 PLA2G2FQ9BZM2 168 aa22.95■■□□□ 1.26
IRF3-228ENST00000601291 XAB2Q9HCS7 855 aaKnown RBP22.95■■□□□ 1.26
IRF3-228ENST00000601291 DNAJC17Q9NVM6 304 aaKnown RBP22.95■■□□□ 1.26
IRF3-228ENST00000601291 KIF26AQ9ULI4 1882 aaPredicted RBP22.95■■□□□ 1.26
IRF3-228ENST00000601291 GRXCR2A6NFK2 248 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 EIF3HO15372 352 aaKnown RBP eCLIP22.94■■□□□ 1.26
IRF3-228ENST00000601291 DGKGP49619 791 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 PMS2P54278 862 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 MAXP61244 160 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 SULT2A1Q06520 285 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 FUT11Q495W5 492 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 IMP4Q96G21 291 aaKnown RBP22.94■■□□□ 1.26
IRF3-228ENST00000601291 SERPINB12Q96P63 405 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 MGME1Q9BQP7 344 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 MLPHQ9BV36 600 aaPredicted RBP22.94■■□□□ 1.26
IRF3-228ENST00000601291 TRMT61BQ9BVS5 477 aaKnown RBP22.94■■□□□ 1.26
IRF3-228ENST00000601291 HPS4Q9NQG7 708 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 FBXO10Q9UK96 956 aa22.94■■□□□ 1.26
IRF3-228ENST00000601291 INTS6Q9UL03 887 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms