RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	KPNA3	O00505	521 aa	Predicted RBP	11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	NVL	O15381	856 aa	Known RBP	11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	MT-CO1	P00395	513 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	IGLV3-25	P01717	112 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	VDR	P11473	427 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	SRC	P12931	536 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	MXI1	P50539	228 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	PITX1	P78337	314 aa	Predicted RBP	11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	CENPC	Q03188	943 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	EIF3I	Q13347	325 aa	Known RBP	11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	CUL2	Q13617	745 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	MORC3	Q14149	939 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	DTX1	Q86Y01	620 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	JAML	Q86YT9	394 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	CHST14	Q8NCH0	376 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	NAT6	Q93015	286 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	PPP1R13B	Q96KQ4	1090 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	IL12RB2	Q99665	862 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	SLC17A9	Q9BYT1	436 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	EPB41L5	Q9HCM4	733 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	EXOC1	Q9NV70	894 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	SDK2	Q58EX2	2172 aa		11.31	□□□□□ -0.6
NUP62-222	ENST00000600935	LRRK1	Q38SD2	2015 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935		A0A1W2PQM1	296 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	TCAF2	A6NFQ2	919 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935		D6RAR5	112 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	LMO7DN	F2Z398	122 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935		K7ERQ8	282 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	ACTN4	O43707	911 aa	Known RBP	11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	CALU	O43852	315 aa	Predicted RBP	11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	BNIP3L	O60238	219 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	PCDH8	O95206	1070 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	PAK4	O96013	591 aa	Predicted RBP	11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	CALCA	P01258	141 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	KRT13	P13646	458 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	ZNF18	P17022	549 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	CHRNA3	P32297	505 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	RABIF	P47224	123 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	C1orf61	Q13536	156 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	PDE1C	Q14123	709 aa	Predicted RBP	11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	CBWD6	Q4V339	395 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	CBWD3	Q5JTY5	395 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	CBWD5	Q5RIA9	395 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	MANEA	Q5SRI9	462 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	ERN2	Q76MJ5	926 aa	Known RBP	11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	ZFAND4	Q86XD8	727 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	FAM26E	Q8N5C1	309 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	TMIE	Q8NEW7	156 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	PAGE5	Q96GU1	130 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	BTN2A3P	Q96KV6	586 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	HSFY1	Q96LI6	401 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	LRRC61	Q9BV99	259 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	HDAC8	Q9BY41	377 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	CLPB	Q9H078	707 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	MIS12	Q9H081	205 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	FOXJ2	Q9P0K8	574 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	PISD	Q9UG56	409 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	SLC25A13	Q9UJS0	675 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	HS3ST2	Q9Y278	367 aa		11.3	□□□□□ -0.6
NUP62-222	ENST00000600935	DOPEY1	Q5JWR5	2465 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	PRAMEF33	A0A0G2JMD5	474 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	BLACE	A4D250	179 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	KCNU1	A8MYU2	1149 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935		F5H5T6	163 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	SMAD6	O43541	496 aa	Known RBP	11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	PRAMEF10	O60809	474 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	FBXO21	O94952	628 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	YEATS4	O95619	227 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	APOE	P02649	317 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	CELA2B	P08218	269 aa	Predicted RBP	11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	ITIH1	P19827	911 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	CCKBR	P32239	447 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	PSMC2	P35998	433 aa	Known RBP	11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	ETV5	P41161	510 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	CASR	P41180	1078 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	RPL34	P49207	117 aa	Known RBP	11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	ADK	P55263	362 aa	Known RBP	11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	PFN3	P60673	137 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	ZCWPW2	Q504Y3	356 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	PRRT3	Q5FWE3	981 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	RESP18	Q5W5W9	173 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	FBXL22	Q6P050	247 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	BEND5	Q7L4P6	421 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	PSMB7	Q99436	277 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	SLC12A9	Q9BXP2	914 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	ADNP	Q9H2P0	1102 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	SYNDIG1	Q9H7V2	258 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	KCNK4	Q9NYG8	393 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	APOBEC3B	Q9UH17	382 aa	Known RBP	11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	SERTAD1	Q9UHV2	236 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	KIAA1257	Q9ULG3	409 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	PADI4	Q9UM07	663 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	COQ4	Q9Y3A0	265 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	PAXBP1	Q9Y5B6	917 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	FADS3	Q9Y5Q0	445 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	LRP4	O75096	1905 aa		11.29	□□□□□ -0.6
NUP62-222	ENST00000600935	OTOG	Q6ZRI0	2925 aa		11.28	□□□□□ -0.6
NUP62-222	ENST00000600935	C9orf172	C9J069	976 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms