RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 KPNA3O00505 521 aaPredicted RBP19.16■□□□□ 0.66
PNKP-213ENST00000599543 CAPNS1P04632 268 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 EPHA8P29322 1005 aaPredicted RBP19.16■□□□□ 0.66
PNKP-213ENST00000599543 CHRNA3P32297 505 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 SOX5P35711 763 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 STAT4Q14765 748 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 SHBQ15464 509 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 LINGO4Q6UY18 593 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 ARCQ7LC44 396 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 FAM131BQ86XD5 332 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 ZNF677Q86XU0 584 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 OR2A12Q8NGT7 310 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 CNDP2Q96KP4 475 aaKnown RBP19.16■□□□□ 0.66
PNKP-213ENST00000599543 HAPLN3Q96S86 360 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 ERVMER34-1Q9H9K5 563 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 METTL5Q9NRN9 209 aaKnown RBP19.16■□□□□ 0.66
PNKP-213ENST00000599543 TMEM59LQ9UK28 342 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 TRPM6Q9BX84 2022 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 CBX4O00257 560 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 LDOC1O95751 146 aaPredicted RBP19.15■□□□□ 0.66
PNKP-213ENST00000599543 PRNPP04156 253 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 CTSLP07711 333 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 STAT1P42224 750 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 RECQLP46063 649 aaPredicted RBP19.15■□□□□ 0.66
PNKP-213ENST00000599543 OVGP1Q12889 678 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 SMAD1Q15797 465 aaKnown RBP19.15■□□□□ 0.66
PNKP-213ENST00000599543 PIP5KL1Q5T9C9 394 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 TRNP1Q6NT89 227 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 C22orf39Q6P5X5 142 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 DHRS13Q6UX07 377 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 TMIEQ8NEW7 156 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 MDM1Q8TC05 714 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 GRIN3AQ8TCU5 1115 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 ZYG11BQ9C0D3 744 aa19.15■□□□□ 0.66
PNKP-213ENST00000599543 XPO4Q9C0E2 1151 aaKnown RBP19.15■□□□□ 0.66
PNKP-213ENST00000599543 NOCTQ9UK39 431 aaKnown RBP19.15■□□□□ 0.66
PNKP-213ENST00000599543 CHD5Q8TDI0 1954 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 TDRD6O60522 2096 aaKnown RBP19.14■□□□□ 0.65
PNKP-213ENST00000599543 ILVBLA1L0T0 632 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 FAM149AA5PLN7 773 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 PRAMEF26H0Y7S4 382 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 ENC1O14682 589 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 SMAD6O43541 496 aaKnown RBP19.14■□□□□ 0.65
PNKP-213ENST00000599543 GLDCP23378 1020 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 TAS2R38P59533 333 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 ATP11AP98196 1134 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 CDR2Q01850 454 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 RETSATQ6NUM9 610 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 ZNF783Q6ZMS7 281 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 BNIPLQ7Z465 357 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 GAS2L3Q86XJ1 694 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 SPATS2Q86XZ4 545 aaKnown RBP19.14■□□□□ 0.65
PNKP-213ENST00000599543 MARCH9Q86YJ5 346 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 EID2Q8N6I1 236 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 EMC1Q8N766 993 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 OR7D4Q8NG98 312 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 PPP1R16AQ96I34 528 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 SPON2Q9BUD6 331 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 RBSNQ9H1K0 784 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 TNKS2Q9H2K2 1166 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 ATP13A1Q9HD20 1204 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 IL36AQ9UHA7 158 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 LHX6Q9UPM6 363 aa19.14■□□□□ 0.65
PNKP-213ENST00000599543 ADAMTS20P59510 1910 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 A0A1W2PQC6 194 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 RNGTTO60942 597 aaKnown RBP19.13■□□□□ 0.65
PNKP-213ENST00000599543 CHRNB2P17787 502 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 RXRGP48443 463 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 CDO1Q16878 200 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 ARL13BQ3SXY8 428 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 NEK5Q6P3R8 708 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 CPLX3Q8WVH0 158 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 BAP1Q92560 729 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 PPARGC1AQ9UBK2 798 aaKnown RBP19.13■□□□□ 0.65
PNKP-213ENST00000599543 PCDHGA1Q9Y5H4 931 aa19.13■□□□□ 0.65
PNKP-213ENST00000599543 A0A1W2PQU0 124 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 LRRC53A6NM62 1247 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 SLC31A1O15431 190 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 RFPL3O75679 317 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 ENDOD1O94919 500 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 CYP1A1P04798 512 aaPredicted RBP19.12■□□□□ 0.65
PNKP-213ENST00000599543 CDK4P11802 303 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 PRLRP16471 622 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 MMP8P22894 467 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 SDC4P31431 198 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 HNF1BP35680 557 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 PBX1P40424 430 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 SERPINH1P50454 418 aaKnown RBP19.12■□□□□ 0.65
PNKP-213ENST00000599543 FMO1Q01740 532 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 GNA12Q03113 381 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 BNIP3Q12983 259 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 DNAJC3Q13217 504 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 ARSIQ5FYB1 569 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 E4F1Q66K89 784 aaPredicted RBP19.12■□□□□ 0.65
PNKP-213ENST00000599543 DPY19L3Q6ZPD9 716 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 ERN2Q76MJ5 926 aaKnown RBP19.12■□□□□ 0.65
PNKP-213ENST00000599543 TMPRSS12Q86WS5 348 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 DRC7Q8IY82 874 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 CHST14Q8NCH0 376 aa19.12■□□□□ 0.65
PNKP-213ENST00000599543 ARRDC3Q96B67 414 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms