RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 SKA1Q96BD8 255 aa23.41■■□□□ 1.34
CCDC61-207ENST00000599044 GDF3Q9NR23 364 aa23.41■■□□□ 1.34
CCDC61-207ENST00000599044 KPNA3O00505 521 aaPredicted RBP23.4■■□□□ 1.34
CCDC61-207ENST00000599044 CD160O95971 181 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 ARF5P84085 180 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 NCAPHQ15003 741 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 STX1AQ16623 288 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 CCDC157Q569K6 752 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 ACBD5Q5T8D3 534 aaPredicted RBP23.4■■□□□ 1.34
CCDC61-207ENST00000599044 MANEALQ5VSG8 457 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 C22orf39Q6P5X5 142 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 DPY19L3Q6ZPD9 716 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 TMPRSS7Q7RTY8 843 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 MFSD2AQ8NA29 543 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 TMIEQ8NEW7 156 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 FUCA2Q9BTY2 467 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 TMEM51Q9NW97 253 aa23.4■■□□□ 1.34
CCDC61-207ENST00000599044 PPARGC1AQ9UBK2 798 aaKnown RBP23.4■■□□□ 1.34
CCDC61-207ENST00000599044 LAMA5O15230 3695 aa23.39■■□□□ 1.34
CCDC61-207ENST00000599044 LGALS16A8MUM7 142 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 RNGTTO60942 597 aaKnown RBP23.39■■□□□ 1.33
CCDC61-207ENST00000599044 TPM2P07951 284 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 RFC1P35251 1148 aaPredicted RBP23.39■■□□□ 1.33
CCDC61-207ENST00000599044 ACVRL1P37023 503 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 MYL5Q02045 173 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 GNA12Q03113 381 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 CCDC185Q8N715 623 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 GRIN3AQ8TCU5 1115 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 CENPIQ92674 756 aaPredicted RBP23.39■■□□□ 1.33
CCDC61-207ENST00000599044 PCMTD1Q96MG8 357 aaPredicted RBP23.39■■□□□ 1.33
CCDC61-207ENST00000599044 CAAP1Q9H8G2 361 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 ATP13A1Q9HD20 1204 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 ANO10Q9NW15 660 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 OR12D3Q9UGF7 316 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 TPX2Q9ULW0 747 aaKnown RBP23.39■■□□□ 1.33
CCDC61-207ENST00000599044 NEU3Q9UQ49 428 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 ADAMTS20P59510 1910 aa23.39■■□□□ 1.33
CCDC61-207ENST00000599044 A0A1W2PQU0 124 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 LRRC10BA6NIK2 292 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 ITGAVP06756 1048 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 PRLRP16471 622 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 SDC4P31431 198 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 CLCN6P51797 869 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 HDAC4P56524 1084 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 UBXN1Q04323 297 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 CLEC16AQ2KHT3 1053 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 ZNF783Q6ZMS7 281 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 NEK11Q8NG66 645 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 MYOCQ99972 504 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 PREBQ9HCU5 417 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 FTSJ1Q9UET6 329 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 IL36AQ9UHA7 158 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 DMTF1Q9Y222 760 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 FCF1Q9Y324 198 aaKnown RBP23.38■■□□□ 1.33
CCDC61-207ENST00000599044 FARP1Q9Y4F1 1045 aaPredicted RBP23.38■■□□□ 1.33
CCDC61-207ENST00000599044 WASF2Q9Y6W5 498 aa23.38■■□□□ 1.33
CCDC61-207ENST00000599044 FAM149AA5PLN7 773 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 SLC31A1O15431 190 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 LEFTY1O75610 366 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 EPHA8P29322 1005 aaPredicted RBP23.37■■□□□ 1.33
CCDC61-207ENST00000599044 PTPN9P43378 593 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 SERPINH1P50454 418 aaKnown RBP23.37■■□□□ 1.33
CCDC61-207ENST00000599044 DNAJC3Q13217 504 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 ZNF284Q2VY69 593 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 SLC45A4Q5BKX6 768 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 TRIM72Q6ZMU5 477 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 KANSL1Q7Z3B3 1105 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 NLRP14Q86W24 1093 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 EID2Q8N6I1 236 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 FAM172AQ8WUF8 416 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 CCDC114Q96M63 670 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 OSBPL2Q9H1P3 480 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 ERVMER34-1Q9H9K5 563 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 FZD3Q9NPG1 666 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 ADAM22Q9P0K1 906 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 DNAI1Q9UI46 699 aa23.37■■□□□ 1.33
CCDC61-207ENST00000599044 ZFR2Q9UPR6 939 aaKnown RBP23.37■■□□□ 1.33
CCDC61-207ENST00000599044 FASNP49327 2511 aaKnown RBP23.36■■□□□ 1.33
CCDC61-207ENST00000599044 PRAMEF26H0Y7S4 382 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 PRNPP04156 253 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 KRT3P12035 628 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 ATP1A3P13637 1013 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 RXRGP48443 463 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 DNA2P51530 1060 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 CLDN6P56747 220 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 NRG1Q02297 640 aaPredicted RBP23.36■■□□□ 1.33
CCDC61-207ENST00000599044 STAT4Q14765 748 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 SETMARQ53H47 684 aaPredicted RBP23.36■■□□□ 1.33
CCDC61-207ENST00000599044 RETSATQ6NUM9 610 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 RWDD4Q6NW29 188 aaKnown RBP23.36■■□□□ 1.33
CCDC61-207ENST00000599044 WDR59Q6PJI9 974 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 DHRS13Q6UX07 377 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 LEKR1Q6ZMV7 388 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 ERN2Q76MJ5 926 aaKnown RBP23.36■■□□□ 1.33
CCDC61-207ENST00000599044 STRADAQ7RTN6 431 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 PROSER1Q86XN7 944 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 PHF13Q86YI8 300 aaPredicted RBP23.36■■□□□ 1.33
CCDC61-207ENST00000599044 MDM1Q8TC05 714 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 VOPP1Q96AW1 172 aa23.36■■□□□ 1.33
CCDC61-207ENST00000599044 KNTC1P50748 2209 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms