RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SHBGP04278 402 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 CYBBP04839 570 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 IFNAR2P48551 515 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 ALS2CLQ60I27 953 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 UHMK1Q8TAS1 419 aaKnown RBP23.75■■□□□ 1.39
SYMPK-212ENST00000598896 NSMCE1Q8WV22 266 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 FRMD8Q9BZ67 464 aaPredicted RBP23.75■■□□□ 1.39
SYMPK-212ENST00000598896 SPHK2Q9NRA0 654 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 PIH1D1Q9NWS0 290 aaKnown RBP23.75■■□□□ 1.39
SYMPK-212ENST00000598896 MUSKO15146 869 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 EIF3HO15372 352 aaKnown RBP eCLIP23.75■■□□□ 1.394e-7■■□□□ 11.9
SYMPK-212ENST00000598896 USP12O75317 370 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 NEBLO76041 1014 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 PENKP01210 267 aaPredicted RBP23.75■■□□□ 1.39
SYMPK-212ENST00000598896 IGDCC3Q8IVU1 814 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 ADGRG2Q8IZP9 1017 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 SMARCD2Q92925 531 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 IRF7Q92985 503 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 ZNF599Q96NL3 588 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 LRRC4CQ9HCJ2 640 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 GDE1Q9NZC3 331 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.75■■□□□ 1.39
SYMPK-212ENST00000598896 DOCK8Q8NF50 2099 aa23.75■■□□□ 1.39
SYMPK-212ENST00000598896 NEDD8-MDP1E9PL57 170 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 ZMPSTE24O75844 475 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 SUN1O94901 812 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 CD160O95971 181 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 LMAN2Q12907 356 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 CBLBQ13191 982 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 LY6G5CQ5SRR4 150 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 DENND2CQ68D51 928 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 APCDD1Q8J025 514 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 FIBINQ8TAL6 211 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 CLDND1Q9NY35 253 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 VPS28Q9UK41 221 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 TEX264Q9Y6I9 313 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 UNC80Q8N2C7 3258 aa23.74■■□□□ 1.39
SYMPK-212ENST00000598896 A0A1W2PPC1 479 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 GJB3O75712 270 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 NUDT17P0C025 328 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 FCARP24071 287 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 CD70P32970 193 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 LTBRP36941 435 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 IHHQ14623 411 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 LINGO4Q6UY18 593 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 FBXO36Q8NEA4 188 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 OTUB2Q96DC9 234 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 ASIC4Q96FT7 647 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 BBS2Q9BXC9 721 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 XAB2Q9HCS7 855 aaKnown RBP23.73■■□□□ 1.39
SYMPK-212ENST00000598896 FAM53CQ9NYF3 392 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 UBA2Q9UBT2 640 aaPredicted RBP23.73■■□□□ 1.39
SYMPK-212ENST00000598896 CHMP2BQ9UQN3 213 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 TTC24A2A3L6 582 aaPredicted RBP23.73■■□□□ 1.39
SYMPK-212ENST00000598896 ERI2A8K979 691 aaKnown RBP23.73■■□□□ 1.39
SYMPK-212ENST00000598896 ELK3P41970 407 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 DSC2Q02487 901 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 NIPAL4Q0D2K0 466 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 PRPSAP1Q14558 356 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 TRIM68Q6AZZ1 485 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 LRRC8BQ6P9F7 803 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 EP400NLQ6ZTU2 488 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 PRPF39Q86UA1 669 aaKnown RBP23.73■■□□□ 1.39
SYMPK-212ENST00000598896 MPP5Q8N3R9 675 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 LMLNQ96KR4 655 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 SLC25A51Q9H1U9 297 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 VPS51Q9UID3 782 aa23.73■■□□□ 1.39
SYMPK-212ENST00000598896 HLA-FP30511 346 aa23.72■■□□□ 1.39
SYMPK-212ENST00000598896 SARNPP82979 210 aaKnown RBP23.72■■□□□ 1.39
SYMPK-212ENST00000598896 ITKQ08881 620 aa23.72■■□□□ 1.39
SYMPK-212ENST00000598896 ZNF844Q08AG5 666 aa23.72■■□□□ 1.39
SYMPK-212ENST00000598896 ZNF235Q14590 738 aa23.72■■□□□ 1.39
SYMPK-212ENST00000598896 ATAT1Q5SQI0 421 aa23.72■■□□□ 1.39
SYMPK-212ENST00000598896 DCAF4L2Q8NA75 395 aa23.72■■□□□ 1.39
SYMPK-212ENST00000598896 PYROXD1Q8WU10 500 aa23.72■■□□□ 1.39
SYMPK-212ENST00000598896 IMP4Q96G21 291 aaKnown RBP23.72■■□□□ 1.39
SYMPK-212ENST00000598896 ACBD3Q9H3P7 528 aa23.72■■□□□ 1.39
SYMPK-212ENST00000598896 INTS6Q9UL03 887 aaKnown RBP23.72■■□□□ 1.39
SYMPK-212ENST00000598896 CDH7Q9ULB5 785 aa23.72■■□□□ 1.39
SYMPK-212ENST00000598896 AAR2Q9Y312 384 aaKnown RBP23.72■■□□□ 1.39
SYMPK-212ENST00000598896 TMEM265A0A087WTH1 108 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 MMP2P08253 660 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 MLNP12872 115 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 TYRP14679 529 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 GPX6P59796 221 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 ASTLQ6HA08 431 aaPredicted RBP23.71■■□□□ 1.39
SYMPK-212ENST00000598896 CES5AQ6NT32 575 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 CAPN12Q6ZSI9 719 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 OR52K1Q8NGK4 314 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 ARRDC2Q8TBH0 407 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 BPIFB1Q8TDL5 484 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 OSCP1Q8WVF1 389 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 SIGLEC10Q96LC7 697 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 APOL2Q9BQE5 337 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 LRRC40Q9H9A6 602 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 TRPV4Q9HBA0 871 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 DUS2Q9NX74 493 aaKnown RBP23.71■■□□□ 1.39
SYMPK-212ENST00000598896 KIAA1522Q9P206 1035 aaPredicted RBP23.71■■□□□ 1.39
SYMPK-212ENST00000598896 DENND4AQ7Z401 1863 aa23.71■■□□□ 1.39
SYMPK-212ENST00000598896 SOX1O00570 391 aaPredicted RBP23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms