RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 MFSD11O43934 449 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 RNASEH1O60930 286 aaKnown RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 ACADMP11310 421 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 TDGF1P13385 188 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 RECQLP46063 649 aaPredicted RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 SERINC3Q13530 473 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 KAZNQ674X7 775 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 C22orf39Q6P5X5 142 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 RYBPQ8N488 228 aaPredicted RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 ATPAF2Q8N5M1 289 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 OR2T3Q8NH03 318 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 PCDH19Q8TAB3 1148 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 FAM71BQ8TC56 605 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 CCDC114Q96M63 670 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 TLR10Q9BXR5 811 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 FAM126AQ9BYI3 521 aaPredicted RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 KLC2Q9H0B6 622 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 IRF2BPLQ9H1B7 796 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 PRDM16Q9HAZ2 1276 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 HS3ST2Q9Y278 367 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 INVSQ9Y283 1065 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 ZSCAN5CA6NGD5 496 aaPredicted RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 SMAD6O43541 496 aaKnown RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 ZMPSTE24O75844 475 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 MAP3K6O95382 1288 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 IL4RP24394 825 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 CAMK2GQ13555 558 aaPredicted RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 TMPRSS6Q8IU80 811 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 STK40Q8N2I9 435 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 UBL4BQ8N7F7 174 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 PRCCQ92733 491 aaPredicted RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 SIPA1Q96FS4 1042 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 RBM41Q96IZ5 413 aaKnown RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 OSBPL9Q96SU4 736 aa20.5■□□□□ 0.87
IRF3-221ENST00000598808 UBA2Q9UBT2 640 aaPredicted RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 PACSIN2Q9UNF0 486 aaPredicted RBP20.5■□□□□ 0.87
IRF3-221ENST00000598808 APOL1O14791 398 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 ATP9BO43861 1147 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 CTNNA1P35221 906 aaKnown RBP20.49■□□□□ 0.87
IRF3-221ENST00000598808 PSMD8P48556 350 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 CLCN6P51797 869 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 SLC20A2Q08357 652 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 SRSF5Q13243 272 aaKnown RBP20.49■□□□□ 0.87
IRF3-221ENST00000598808 ERCC6LQ2NKX8 1250 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 NCBP2-AS2Q69YL0 99 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 MFSD7Q6UXD7 560 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 ARHGAP36Q6ZRI8 547 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 CEP68Q76N32 757 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 WDR5BQ86VZ2 330 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 ARHGAP12Q8IWW6 846 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 TP53INP2Q8IXH6 220 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 KATNAL2Q8IYT4 538 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 GANCQ8TET4 914 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 PBKQ96KB5 322 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 SPACA7Q96KW9 195 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 MRGPRX1Q96LB2 322 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 RNF157Q96PX1 679 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 TM6SF2Q9BZW4 377 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 MKRN2Q9H000 416 aaKnown RBP20.49■□□□□ 0.87
IRF3-221ENST00000598808 FARP1Q9Y4F1 1045 aaPredicted RBP20.49■□□□□ 0.87
IRF3-221ENST00000598808 PCDHGA2Q9Y5H1 932 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 CKAP5Q14008 2032 aa20.49■□□□□ 0.87
IRF3-221ENST00000598808 NYNRINQ9P2P1 1898 aaKnown RBP20.48■□□□□ 0.87
IRF3-221ENST00000598808 TARSL2A2RTX5 802 aaKnown RBP20.48■□□□□ 0.87
IRF3-221ENST00000598808 CCDC66A2RUB6 948 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 J3KR12 359 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 TMCC1O94876 653 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 ZRANB2O95218 330 aaKnown RBP eCLIP20.48■□□□□ 0.87
IRF3-221ENST00000598808 PAFAH1B1P43034 410 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 RPS6KA1Q15418 735 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 ELF2Q15723 593 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 USP39Q53GS9 565 aaKnown RBP20.48■□□□□ 0.87
IRF3-221ENST00000598808 C9orf64Q5T6V5 341 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 ZNF776Q68DI1 518 aaPredicted RBP20.48■□□□□ 0.87
IRF3-221ENST00000598808 SPOCD1Q6ZMY3 1216 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 PRR23BQ6ZRT6 265 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 NT5DC3Q86UY8 548 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 RASSF3Q86WH2 238 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 MMAAQ8IVH4 418 aaKnown RBP20.48■□□□□ 0.87
IRF3-221ENST00000598808 RLN3Q8WXF3 142 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 OR8D1Q8WZ84 308 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 FBRSQ9HAH7 460 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 ARGLU1Q9NWB6 273 aaPredicted RBP20.48■□□□□ 0.87
IRF3-221ENST00000598808 EBF1Q9UH73 591 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 IPO11Q9UI26 975 aaKnown RBP20.48■□□□□ 0.87
IRF3-221ENST00000598808 HEY1Q9Y5J3 304 aa20.48■□□□□ 0.87
IRF3-221ENST00000598808 PIEZO1Q92508 2521 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 C3orf70A6NLC5 250 aaPredicted RBP20.47■□□□□ 0.87
IRF3-221ENST00000598808 RPP40O75818 363 aaKnown RBP20.47■□□□□ 0.87
IRF3-221ENST00000598808 IL1BP01584 269 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 DNTTP04053 509 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 CTNNA2P26232 953 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 HOXA6P31267 233 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 COPAP53621 1224 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 RWDD2BP57060 319 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 RHOAP61586 193 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 ELAVL3Q14576 367 aaKnown RBP20.47■□□□□ 0.87
IRF3-221ENST00000598808 CCDC181Q5TID7 509 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 AFMIDQ63HM1 303 aa20.47■□□□□ 0.87
IRF3-221ENST00000598808 DSG4Q86SJ6 1040 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms