RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 GCNT7Q6ZNI0 430 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 HORMAD1Q86X24 394 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 WDTC1Q8N5D0 677 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 OR2A12Q8NGT7 310 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 WBP1Q96G27 269 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 RPRD1AQ96P16 312 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 CALN1Q9BXU9 219 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 VPS16Q9H269 839 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 POLR1BQ9H9Y6 1135 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 DDIT4Q9NX09 232 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 COX16Q9P0S2 106 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 SLC25A13Q9UJS0 675 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 VANGL2Q9ULK5 521 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 SSUH2Q9Y2M2 353 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 HS3ST4Q9Y661 456 aa16.86■□□□□ 0.29
SHKBP1-215ENST00000597649 PYCARD-AS1I3L0S3 204 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 K7ESM1 405 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 P4HA2O15460 535 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 NEBLO76041 1014 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 SERPINC1P01008 464 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 OXCT1P55809 520 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 TMPRSS3P57727 454 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 RHDQ02161 417 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 LY6DQ14210 128 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 FILIP1LQ4L180 1135 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 SEL1L3Q68CR1 1132 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 NEK5Q6P3R8 708 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 ABI3BPQ7Z7G0 1075 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 DEFB106AQ8N104 65 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 FAM181AQ8N9Y4 354 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 CHST14Q8NCH0 376 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 ZNF606Q8WXB4 792 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 TTC9Q92623 222 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 BMFQ96LC9 184 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 DEPDC7Q96QD5 511 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 SLC2A13Q96QE2 648 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 PSMB7Q99436 277 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 TRIM62Q9BVG3 475 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 NDST4Q9H3R1 872 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 FAM204AQ9H8W3 233 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 NLGN3Q9NZ94 848 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 LIMA1Q9UHB6 759 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 HS3ST2Q9Y278 367 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 TBC1D30Q9Y2I9 924 aa16.85■□□□□ 0.29
SHKBP1-215ENST00000597649 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 KPNA3O00505 521 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 SCAMP1O15126 338 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 KLK10O43240 276 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 SMAD6O43541 496 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 SNAP91O60641 907 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 CNTN5O94779 1100 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 ATP1A3P13637 1013 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 KRT5P13647 590 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 CCR1P32246 355 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 CHRNA3P32297 505 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 ERVPABLB-1P60509 514 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 CDK17Q00537 523 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 ZNF177Q13360 481 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 FGL2Q14314 439 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 C5orf22Q49AR2 442 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 HS1BP3Q53T59 392 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 FKBP15Q5T1M5 1219 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 BROXQ5VW32 411 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 Q6ZSR6 202 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 LSMEM2Q8N112 164 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 VCPIP1Q96JH7 1222 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 VPS28Q9UK41 221 aa16.84■□□□□ 0.29
SHKBP1-215ENST00000597649 CAPN8A6NHC0 703 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 I6L893 689 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 GRAP2O75791 330 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 GP1BAP07359 652 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 SLC2A3P11169 496 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 KRT10P13645 584 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 TGM2P21980 687 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 HNRNPA2B1P22626 353 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 RRM1P23921 792 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 AKT2P31751 481 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 COPB1P53618 953 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 UCNP55089 124 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 PDCLQ13371 301 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 MEA1Q16626 185 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 TMEM259Q4ZIN3 620 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 OR6B2Q6IFH4 312 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 GBP6Q6ZN66 633 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 TMIEQ8NEW7 156 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 IFI44Q8TCB0 444 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 SNRNP27Q8WVK2 155 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 KCNE4Q8WWG9 221 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 RNF34Q969K3 372 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 IFT43Q96FT9 208 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 PRR11Q96HE9 360 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 PPP1R9BQ96SB3 815 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 INTS2Q9H0H0 1204 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 HSD3B7Q9H2F3 369 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 UBE2TQ9NPD8 197 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 ANLNQ9NQW6 1124 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 GPR27Q9NS67 375 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 KLF15Q9UIH9 416 aa16.83■□□□□ 0.28
SHKBP1-215ENST00000597649 SNX10Q9Y5X0 201 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms