RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 EPHB2P29323 1055 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 ATXN3P54252 364 aaPredicted RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 GEMIN4P57678 1058 aaKnown RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 YBEYP58557 167 aaPredicted RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 RACK1P63244 317 aaKnown RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 CNTN1Q12860 1018 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 TDRD12Q587J7 1177 aaKnown RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 ERMARDQ5T6L9 678 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 AGBL4Q5VU57 503 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 IL27RAQ6UWB1 636 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 DPY19L3Q6ZPD9 716 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 CYP4V2Q6ZWL3 525 aaPredicted RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 VPS36Q86VN1 386 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 UMODL1-AS1Q8N2C9 162 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 OR14C36Q8NHC7 312 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 CPLX3Q8WVH0 158 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 ZNF653Q96CK0 615 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 EPAS1Q99814 870 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 NCAPGQ9BPX3 1015 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 GTPBP2Q9BX10 602 aaKnown RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 NENFQ9UMX5 172 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 TPRP12270 2363 aaKnown RBP13.32□□□□□ -0.28
USE1-207ENST00000596136 DOCK9Q9BZ29 2069 aa13.32□□□□□ -0.28
USE1-207ENST00000596136 A0A087X0T9 212 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 ZSCAN5CA6NGD5 496 aaPredicted RBP13.31□□□□□ -0.28
USE1-207ENST00000596136 FGF10O15520 208 aaPredicted RBP13.31□□□□□ -0.28
USE1-207ENST00000596136 CBFA2T2O43439 604 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 RNF8O76064 485 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 FAM228BP0C875 321 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 MIPP30301 263 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 CASP14P31944 242 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 PCK1P35558 622 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 CSNK1EP49674 416 aaKnown RBP13.31□□□□□ -0.28
USE1-207ENST00000596136 TAS2R38P59533 333 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 POLD3Q15054 466 aaPredicted RBP13.31□□□□□ -0.28
USE1-207ENST00000596136 UAP1L1Q3KQV9 507 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 CARD16Q5EG05 197 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 PIP5KL1Q5T9C9 394 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 N4BP2L1Q5TBK1 243 aaPredicted RBP13.31□□□□□ -0.28
USE1-207ENST00000596136 DBX2Q6ZNG2 339 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 CHST14Q8NCH0 376 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 OR2I1PQ8NGU4 316 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 SNX19Q92543 992 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 VOPP1Q96AW1 172 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 PEBP4Q96S96 227 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 HDAC8Q9BY41 377 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 CATSPERBQ9H7T0 1116 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 DONSONQ9NYP3 566 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 IL36AQ9UHA7 158 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 AP4E1Q9UPM8 1137 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 WASF2Q9Y6W5 498 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 PLXNA2O75051 1894 aa13.31□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3DA0A087WVF3 549 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3IA0A087WXS9 549 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3EA0A087X179 549 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3KA0A087X1G2 549 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 A0A1B0GVT2 93 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3FA6NER0 549 aaPredicted RBP13.3□□□□□ -0.28
USE1-207ENST00000596136 FAM47DPA6NHR8 397 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3LB9A6J9 549 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 RNF103O00237 685 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 PLK4O00444 970 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 VILLO15195 856 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 CREB3O43889 395 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 BNIP3LO60238 219 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 LRCH4O75427 683 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 CYP1A2P05177 515 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3HP0C7X1 549 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 NUDT1P36639 197 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 RECQLP46063 649 aaPredicted RBP13.3□□□□□ -0.28
USE1-207ENST00000596136 HCAR3P49019 387 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 NOVA1P51513 510 aaKnown RBP13.3□□□□□ -0.28
USE1-207ENST00000596136 ZNF135P52742 658 aaPredicted RBP13.3□□□□□ -0.28
USE1-207ENST00000596136 CCDC15Q0P6D6 951 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 SERINC3Q13530 473 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TEAD4Q15561 434 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 CA9Q16790 459 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 KIF19Q2TAC6 998 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 PARP15Q460N3 678 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 INO80DQ53TQ3 878 aaPredicted RBP13.3□□□□□ -0.28
USE1-207ENST00000596136 SPECC1LQ69YQ0 1117 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3GQ6DHY5 549 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3CQ6IPX1 549 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 PSAPL1Q6NUJ1 521 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 NEK5Q6P3R8 708 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 ALKBH5Q6P6C2 394 aaKnown RBP13.3□□□□□ -0.28
USE1-207ENST00000596136 TRIM69Q86WT6 500 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 TBC1D3Q8IZP1 549 aaPredicted RBP13.3□□□□□ -0.28
USE1-207ENST00000596136 NIPA2Q8N8Q9 360 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 CASKIN2Q8WXE0 1202 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 ARRDC3Q96B67 414 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 HEPHQ9BQS7 1158 aa13.3□□□□□ -0.28
USE1-207ENST00000596136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.3□□□□□ -0.28
USE1-207ENST00000596136 SNRNP25Q9BV90 132 aaKnown RBP13.3□□□□□ -0.28
USE1-207ENST00000596136 TNKS2Q9H2K2 1166 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms