RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 COPAP53621 1224 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 NRLP54845 237 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 COPS2P61201 443 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 SLC10A2Q12908 348 aaPredicted RBP19.68■□□□□ 0.74
PNKP-207ENST00000596014 INO80DQ53TQ3 878 aaPredicted RBP19.68■□□□□ 0.74
PNKP-207ENST00000596014 Q6ZVU0 165 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 TMPRSS6Q8IU80 811 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 TRIM58Q8NG06 486 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 OR2T3Q8NH03 318 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 MRGPRX1Q96LB2 322 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 CEP44Q9C0F1 390 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 SLC6A17Q9H1V8 727 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 SP110Q9HB58 689 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 BCCIPQ9P287 314 aaKnown RBP eCLIP19.68■□□□□ 0.74
PNKP-207ENST00000596014 FCF1Q9Y324 198 aaKnown RBP19.68■□□□□ 0.74
PNKP-207ENST00000596014 VPS13AQ96RL7 3174 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 hCG_1818297A0A087WSY0 165 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 PYGMP11217 842 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 ZFXP17010 805 aaPredicted RBP19.68■□□□□ 0.74
PNKP-207ENST00000596014 NDUFV2P19404 249 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 IL10RBQ08334 325 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 GALNT2Q10471 571 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 TFDP2Q14188 446 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 PPP2R5EQ16537 467 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 MEI1Q5TIA1 1274 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 KAZNQ674X7 775 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 C22orf39Q6P5X5 142 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 PGBD3Q8N328 593 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 KIF18AQ8NI77 898 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 CASKIN2Q8WXE0 1202 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 FAM129BQ96TA1 746 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 FBRSQ9HAH7 460 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 DTLQ9NZJ0 730 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 AXIN1O15169 862 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 MAFKO60675 156 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 CST8O60676 142 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 MAP3K6O95382 1288 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 DYNLT1P63172 113 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 ADCY2Q08462 1091 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 METTL3Q86U44 580 aaKnown RBP19.67■□□□□ 0.74
PNKP-207ENST00000596014 LONP2Q86WA8 852 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 LRRC49Q8IUZ0 686 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 FANCMQ8IYD8 2048 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 STK40Q8N2I9 435 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 ATPAF2Q8N5M1 289 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 ISG20Q96AZ6 181 aaKnown RBP19.67■□□□□ 0.74
PNKP-207ENST00000596014 RSPH9Q9H1X1 276 aaPredicted RBP19.67■□□□□ 0.74
PNKP-207ENST00000596014 TNKS2Q9H2K2 1166 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 UBA2Q9UBT2 640 aaPredicted RBP19.67■□□□□ 0.74
PNKP-207ENST00000596014 MYO15AQ9UKN7 3530 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 HCN4Q9Y3Q4 1203 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 HEY1Q9Y5J3 304 aa19.67■□□□□ 0.74
PNKP-207ENST00000596014 BNIP3LO60238 219 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 TMCC1O94876 653 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 C7P10643 843 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 GARSP41250 739 aaKnown RBP19.66■□□□□ 0.74
PNKP-207ENST00000596014 DNA2P51530 1060 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 ELAVL3Q14576 367 aaKnown RBP19.66■□□□□ 0.74
PNKP-207ENST00000596014 AADACL2Q6P093 401 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 PCDH20Q8N6Y1 951 aaKnown RBP19.66■□□□□ 0.74
PNKP-207ENST00000596014 OR2A12Q8NGT7 310 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 HEMGNQ9BXL5 484 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 OSBPL8Q9BZF1 889 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 TPSD1Q9BZJ3 242 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 ZSCAN32Q9NX65 697 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 USP34Q70CQ2 3546 aa19.66■□□□□ 0.74
PNKP-207ENST00000596014 MX2P20592 715 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 CYTH1Q15438 398 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 NPNTQ6UXI9 565 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 SYT10Q6XYQ8 523 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 WDR5BQ86VZ2 330 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 ZBTB44Q8NCP5 570 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 PRCCQ92733 491 aaPredicted RBP19.65■□□□□ 0.74
PNKP-207ENST00000596014 SIPA1Q96FS4 1042 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 EFR3BQ9Y2G0 817 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 MCF2LO15068 1137 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 PEX11BO96011 259 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 PTPN7P35236 360 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 CETN2P41208 172 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 PTPN5P54829 565 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 RPS14P62263 151 aaKnown RBP19.65■□□□□ 0.74
PNKP-207ENST00000596014 ETF1P62495 437 aaKnown RBP19.65■□□□□ 0.74
PNKP-207ENST00000596014 ZNF211Q13398 564 aaPredicted RBP19.65■□□□□ 0.74
PNKP-207ENST00000596014 RPS6KA1Q15418 735 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 CARD16Q5EG05 197 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 DCAF12L1Q5VU92 463 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 BBS12Q6ZW61 710 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 CACUL1Q86Y37 369 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 OR8D1Q8WZ84 308 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 CCDC114Q96M63 670 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 TSGA13Q96PP4 275 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 HERPUD2Q9BSE4 406 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 TM6SF2Q9BZW4 377 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 SAE1Q9UBE0 346 aaPredicted RBP19.65■□□□□ 0.74
PNKP-207ENST00000596014 PCDHGA2Q9Y5H1 932 aa19.65■□□□□ 0.74
PNKP-207ENST00000596014 RNASEH1O60930 286 aaKnown RBP19.64■□□□□ 0.73
PNKP-207ENST00000596014 TGM2P21980 687 aa19.64■□□□□ 0.73
PNKP-207ENST00000596014 RECQLP46063 649 aaPredicted RBP19.64■□□□□ 0.73
PNKP-207ENST00000596014 NR2C2P49116 596 aa19.64■□□□□ 0.73
PNKP-207ENST00000596014 RFTN1Q14699 578 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms