RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SLC17A7Q9P2U7 560 aa17.38■□□□□ 0.37
SHKBP1-205ENST00000594973 TM9SF1O15321 606 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 PTPN3P26045 913 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 MGAT1P26572 445 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 GRK4P32298 578 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 GATMP50440 423 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 CBLBQ13191 982 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 TMED1Q13445 227 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 DNAL1Q4LDG9 190 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 ABI1Q8IZP0 508 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 ZNF276Q8N554 614 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 ABCC13Q9NSE7 274 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 TTC3P53804 2025 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 TRIM49D1C9J1S8 452 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 TRDMT1O14717 391 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 LPXNO60711 386 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 USP12O75317 370 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 IL1BP01584 269 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 CSH1P0DML2 217 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 CSH2P0DML3 217 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 PRKCHP24723 683 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 BMPR2Q13873 1038 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 HSP90AA5PQ58FG0 334 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 DBF4BQ8NFT6 615 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 GPR152Q8TDT2 470 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 CASP10Q92851 521 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 PRICKLE1Q96MT3 831 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 KCNK13Q9HB14 408 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 NMUR1Q9HB89 426 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 ALG13Q9NP73 1137 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 PCDHA11Q9Y5I1 949 aa17.37■□□□□ 0.37
SHKBP1-205ENST00000594973 LAMA2P24043 3122 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 NBNO60934 754 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 SELPP16109 830 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 RPL5P46777 297 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 CHN2P52757 468 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 ARPP19P56211 112 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 PPIDQ08752 370 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 DCTN2Q13561 401 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 TTC39BQ5VTQ0 682 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 LRRC8BQ6P9F7 803 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 KYAT3Q6YP21 454 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 SCD5Q86SK9 330 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 PANX3Q96QZ0 392 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 TMEM120AQ9BXJ8 343 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 MANSC1Q9H8J5 431 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 HCSTQ9UBK5 93 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 A0A1W2PQH9 124 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 SDR42E2A6NKP2 422 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 B2RBV5 119 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 VILLO15195 856 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 IRAK2O43187 625 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 OAZ2O95190 189 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 BAG2O95816 211 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 MOCS2O96007 188 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 CD97P48960 835 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 SERPINB8P50452 374 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 ZBTB17Q13105 803 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 ADRM1Q16186 407 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 VARS2Q5ST30 1063 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 SCML4Q8N228 414 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 TTC1Q99614 292 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 TRIM62Q9BVG3 475 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 CFHR5Q9BXR6 569 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 FTHL17Q9BXU8 183 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 TMEM161AQ9NX61 479 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 PLA2G4CQ9UP65 541 aa17.36■□□□□ 0.37
SHKBP1-205ENST00000594973 hCG_2014768A0A024R1R8 64 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 NCAM2O15394 837 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 ZBTB24O43167 697 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 PAGE1O75459 146 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 IGLV3-25P01717 112 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 CDK4P11802 303 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 SERPINB6P35237 376 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 GARSP41250 739 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 FAM171A1Q5VUB5 890 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 DCP1BQ8IZD4 617 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 TTC9BQ8N6N2 239 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 SLAIN1Q8ND83 568 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 ALKBH8Q96BT7 664 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 OXNAD1Q96HP4 312 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 TSSK1BQ9BXA7 367 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 EIF2B3Q9NR50 452 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 OSER1Q9NX31 292 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 IGSF9Q9P2J2 1179 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 SLC17A6Q9P2U8 582 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 DFFAO00273 331 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 FCHO1O14526 889 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 BIRC5O15392 142 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 KRT37O76014 449 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 MLNP12872 115 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 VCLP18206 1134 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 MX2P20592 715 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 PBX3P40426 434 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 OVGP1Q12889 678 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 CES3Q6UWW8 571 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 DHDDSQ86SQ9 333 aa17.35■□□□□ 0.37
SHKBP1-205ENST00000594973 ULK2Q8IYT8 1036 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms