RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 LSM12Q3MHD2 195 aaKnown RBP16.77■□□□□ 0.27
LIG1-206ENST00000594067 TOP6BLQ8N6T0 577 aa16.77■□□□□ 0.27
LIG1-206ENST00000594067 USP33Q8TEY7 942 aa16.77■□□□□ 0.27
LIG1-206ENST00000594067 CELF6Q96J87 481 aaKnown RBP16.77■□□□□ 0.27
LIG1-206ENST00000594067 SCYL1Q96KG9 808 aa16.77■□□□□ 0.27
LIG1-206ENST00000594067 NUF2Q9BZD4 464 aa16.77■□□□□ 0.27
LIG1-206ENST00000594067 C6orf203Q9P0P8 240 aaPredicted RBP16.77■□□□□ 0.27
LIG1-206ENST00000594067 PIGNO95427 931 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 USP17L7P0C7H9 530 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 FAM200BP0CF97 657 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 PMLP29590 882 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 DAOAP59103 153 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 METTL21CQ5VZV1 264 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 CRTAC1Q9NQ79 661 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 FBXW11Q9UKB1 542 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 TLK1Q9UKI8 766 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 IPPQ9Y573 584 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 MATN2O00339 956 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 DYNC1LI2O43237 492 aaPredicted RBP16.76■□□□□ 0.27
LIG1-206ENST00000594067 CLPTM1O96005 669 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 SBK3P0C264 359 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 HOXD8P13378 290 aaPredicted RBP16.76■□□□□ 0.27
LIG1-206ENST00000594067 MSX2P35548 267 aaPredicted RBP16.76■□□□□ 0.27
LIG1-206ENST00000594067 NPY2RP49146 381 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 NUMBP49757 651 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 SNX17Q15036 470 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 ARL13AQ5H913 290 aaPredicted RBP16.76■□□□□ 0.27
LIG1-206ENST00000594067 SEL1L3Q68CR1 1132 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 ISLR2Q6UXK2 745 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 RBM44Q6ZP01 1051 aaKnown RBP16.76■□□□□ 0.27
LIG1-206ENST00000594067 METTL25Q8N6Q8 603 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 KCTD4Q8WVF5 259 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 EDEM1Q92611 657 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 NTAN1Q96AB6 310 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 SLC9A7Q96T83 725 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 PTTG2Q9NZH5 202 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 HSFX1Q9UBD0 423 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 STK39Q9UEW8 545 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 RUVBL2Q9Y230 463 aaKnown RBP16.76■□□□□ 0.27
LIG1-206ENST00000594067 LZTS1Q9Y250 596 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 RAP2CQ9Y3L5 183 aa16.76■□□□□ 0.27
LIG1-206ENST00000594067 TIMM13Q9Y5L4 95 aaPredicted RBP16.76■□□□□ 0.27
LIG1-206ENST00000594067 THRAP10827 490 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 NAGLUP54802 743 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 FRG1Q14331 258 aaKnown RBP16.75■□□□□ 0.27
LIG1-206ENST00000594067 USP10Q14694 798 aaKnown RBP16.75■□□□□ 0.27
LIG1-206ENST00000594067 ANO4Q32M45 955 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 XKR4Q5GH76 650 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 TMEM198Q66K66 360 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 ZYG11AQ6WRX3 759 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 OTOP3Q7RTS5 596 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 TMEM151AQ8N4L1 468 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 MARK4Q96L34 752 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 ZFP42Q96MM3 310 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 SMOQ99835 787 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 MCMBPQ9BTE3 642 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 C1QTNF1Q9BXJ1 281 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 UNKQ9C0B0 810 aaKnown RBP16.75■□□□□ 0.27
LIG1-206ENST00000594067 IL22Q9GZX6 179 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 TMEM30AQ9NV96 361 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 ZDHHC2Q9UIJ5 367 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 MAGEB16A2A368 324 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 ERI2A8K979 691 aaKnown RBP16.75■□□□□ 0.27
LIG1-206ENST00000594067 HDAC3O15379 428 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 NCAM2O15394 837 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 H2AFYO75367 372 aaKnown RBP16.75■□□□□ 0.27
LIG1-206ENST00000594067 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
LIG1-206ENST00000594067 RPL14P50914 215 aaKnown RBP16.75■□□□□ 0.27
LIG1-206ENST00000594067 LIPMQ5VYY2 423 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 ITPRIPL1Q6GPH6 555 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 DSELQ8IZU8 1212 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 SMG8Q8ND04 991 aaKnown RBP16.75■□□□□ 0.27
LIG1-206ENST00000594067 HDAC11Q96DB2 347 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 CATSPER2Q96P56 530 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 DRC3Q9H069 523 aa16.75■□□□□ 0.27
LIG1-206ENST00000594067 SMIM35A0A1B0GVV1 85 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 RGSL1A5PLK6 1076 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 CFLARO15519 480 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 GRID2O43424 1007 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 TFEBP19484 476 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 CDC42EP1Q00587 391 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 SCAPQ12770 1279 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 ZNF460Q14592 562 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 NXNQ6DKJ4 435 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 ZC3HC1Q86WB0 502 aaKnown RBP16.74■□□□□ 0.27
LIG1-206ENST00000594067 SLC41A1Q8IVJ1 513 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 TEKT5Q96M29 485 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 TSNARE1Q96NA8 513 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 CDRT15Q96T59 188 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 GPR22Q99680 433 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 PREBQ9HCU5 417 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 TRHDEQ9UKU6 1024 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 RAD54BQ9Y620 910 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 JUNP05412 331 aaKnown RBP16.74■□□□□ 0.27
LIG1-206ENST00000594067 AXLP30530 894 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 GALNT2Q10471 571 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 CDH17Q12864 832 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 CNGA3Q16281 694 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 NADK2Q4G0N4 442 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 SPATA6LQ8N4H0 392 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms