RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 EPAS1Q99814 870 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 CEP44Q9C0F1 390 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 THAP2Q9H0W7 228 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 MRPL47Q9HD33 250 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 TM9SF3Q9HD45 589 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 DNAAF2Q9NVR5 837 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 PCSK1NQ9UHG2 260 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 NENFQ9UMX5 172 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 AP4E1Q9UPM8 1137 aa18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 FARP1Q9Y4F1 1045 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-202ENST00000593764 C1QTNF3-AMACRE9PGA6 284 aa18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 CBFA2T2O43439 604 aa18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 LRCH4O75427 683 aa18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 RNF8O76064 485 aa18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 KCNK5O95279 499 aa18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 CSNK1EP49674 416 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 ATXN3P54252 364 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 AGBL4Q5VU57 503 aa18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 ALKBH5Q6P6C2 394 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 VPS36Q86VN1 386 aa18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 PCDH20Q8N6Y1 951 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 ISG20Q96AZ6 181 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 SNRNP25Q9BV90 132 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 ZDHHC5Q9C0B5 715 aa18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 KLC2Q9H0B6 622 aa18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 FCF1Q9Y324 198 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-202ENST00000593764 A0A1W2PPC4 97 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 SLC7A4O43246 635 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 PLRG1O43660 514 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 KDELR3O43731 214 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 CYP1A2P05177 515 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 HTR7P34969 479 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 CCR5P51681 352 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 AFF3P51826 1226 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 TAS2R38P59533 333 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 ARSIQ5FYB1 569 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 VSTM4Q8IW00 320 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 UMODL1-AS1Q8N2C9 162 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 VOPP1Q96AW1 172 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 ARRDC3Q96B67 414 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 CCDC114Q96M63 670 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 KCTD15Q96SI1 283 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 DNAJC7Q99615 494 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 KDM4CQ9H3R0 1056 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 DHX35Q9H5Z1 703 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 CATSPERBQ9H7T0 1116 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 HPCAL4Q9UM19 191 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 WASF2Q9Y6W5 498 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 CABIN1Q9Y6J0 2220 aa18.85■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3DA0A087WVF3 549 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3IA0A087WXS9 549 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3EA0A087X179 549 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3KA0A087X1G2 549 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 A0A1B0GVT2 93 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3FA6NER0 549 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 UPK3BL1B0FP48 263 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 EIF3CLB5ME19 914 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3LB9A6J9 549 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 UPK3BL2E5RIL1 263 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 GIPC1O14908 333 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 FGF10O15520 208 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 LATO43561 262 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 PRPSAP2O60256 369 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 OPHN1O60890 802 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 LEFTY1O75610 366 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 PRNPP04156 253 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3HP0C7X1 549 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 CSRP1P21291 193 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 IL1R2P27930 398 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 PCK1P35558 622 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 EIF4A3P38919 411 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 YBEYP58557 167 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TPI1P60174 286 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 PPP2CBP62714 309 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 PPP2CAP67775 309 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 ACAP1Q15027 740 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 ASTE1Q2TB18 679 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 CARD16Q5EG05 197 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 CCDC122Q5T0U0 273 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 PIP5KL1Q5T9C9 394 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3GQ6DHY5 549 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3CQ6IPX1 549 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 LEKR1Q6ZMV7 388 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 PIP4P1Q86T03 277 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 PSTKQ8IV42 348 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 PLPP6Q8IY26 295 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 TBC1D3Q8IZP1 549 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 OR8K1Q8NGG5 319 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 ARHGEF26Q96DR7 871 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 HMCESQ96FZ2 354 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 EIF3CQ99613 913 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 IL36AQ9UHA7 158 aa18.84■□□□□ 0.61
SHKBP1-202ENST00000593764 RASA4BC9J798 803 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 KPNA3O00505 521 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 WNT9AO14904 365 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 RASA4O43374 803 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 ADRB1P08588 477 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 CD59P13987 128 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 TCF4P15884 667 aa18.83■□□□□ 0.6
SHKBP1-202ENST00000593764 RECQLP46063 649 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms