RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 GCN1Q92616 2671 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 CPED1A4D0V7 1026 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 AGRPO00253 132 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 ALOX15BO15296 676 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 SPINT1O43278 529 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 MED7O43513 233 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 MAGEC1O60732 1142 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 HSF2BPO75031 334 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 ZNF821O75541 412 aaPredicted RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 DAB1O75553 588 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 LEFTY1O75610 366 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 PAK4O96013 591 aaPredicted RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 HNRNPA2B1P22626 353 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 CDH4P55283 916 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 PCBP4P57723 403 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 E2F1Q01094 437 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 OVGP1Q12889 678 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 STIM1Q13586 685 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 FZD2Q14332 565 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 DEFB133Q30KQ1 61 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 LRRC73Q5JTD7 316 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 PERM1Q5SV97 790 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 TTC39BQ5VTQ0 682 aaPredicted RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 TRNP1Q6NT89 227 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 GUSBP11Q6P575 273 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 FOXR1Q6PIV2 292 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 TRIM65Q6PJ69 517 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 NYAP1Q6ZVC0 841 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 ERN2Q76MJ5 926 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 RBFAQ8N0V3 343 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 NETO2Q8NC67 525 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 ZNF248Q8NDW4 579 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 OR6K2Q8NGY2 324 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 IFI44Q8TCB0 444 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 MAPK15Q8TD08 544 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 ATXN7L3BQ96GX2 97 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 VCPIP1Q96JH7 1222 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 ASCL3Q9NQ33 180 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 PNMA8BQ9ULN7 279 aaPredicted RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 HS3ST2Q9Y278 367 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 TBC1D30Q9Y2I9 924 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 FCF1Q9Y324 198 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 ATP6V1DQ9Y5K8 247 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 WASF2Q9Y6W5 498 aa11.46□□□□□ -0.57
PRKCSH-220ENST00000593104 RP1P56715 2156 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 GOLGA6L4A6NEF3 574 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 SCAMP1O15126 338 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 SLC2A3P11169 496 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 AKT2P31751 481 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 SULT1E1P49888 294 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 DNA2P51530 1060 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 C1orf61Q13536 156 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 MORC3Q14149 939 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 TMEM259Q4ZIN3 620 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 EFHC1Q5JVL4 640 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 LEKR1Q6ZMV7 388 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 C11orf57Q6ZUT1 292 aaPredicted RBP11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 PARS2Q7L3T8 475 aaKnown RBP11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 ABI3BPQ7Z7G0 1075 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 SLC47A2Q86VL8 602 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 ZNF548Q8NEK5 533 aaPredicted RBP11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 KCNE4Q8WWG9 221 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 DEPDC7Q96QD5 511 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 TBCBQ99426 244 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 SPON2Q9BUD6 331 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 TRIM62Q9BVG3 475 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 MAGEB5Q9BZ81 275 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 TM6SF2Q9BZW4 377 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 DYRK4Q9NR20 520 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 NLGN3Q9NZ94 848 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 IL36AQ9UHA7 158 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 TPX2Q9ULW0 747 aaKnown RBP11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 DOCK4Q8N1I0 1966 aa11.45□□□□□ -0.58
PRKCSH-220ENST00000593104 A6NNZ2 444 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 SRGAP2O75044 1071 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 GADD45BO75293 160 aaPredicted RBP11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 CLDN11O75508 207 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 CELA2BP08218 269 aaPredicted RBP11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 NUDT1P36639 197 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 ABL2P42684 1182 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 ARF5P84085 180 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 SLC6A3Q01959 620 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 EIF2B5Q13144 721 aaKnown RBP11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 PAK1Q13153 545 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 SRSF6Q13247 344 aaKnown RBP11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 PDE1CQ14123 709 aaPredicted RBP11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 ISXQ2M1V0 245 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 C5orf22Q49AR2 442 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 HS1BP3Q53T59 392 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 EFL1Q7Z2Z2 1120 aaKnown RBP11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 CACTIN-AS1Q8N1I8 211 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 DCAF4L2Q8NA75 395 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 TMIEQ8NEW7 156 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 LMX1AQ8TE12 382 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 TTC9Q92623 222 aa11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 ZNF578Q96N58 590 aaPredicted RBP11.44□□□□□ -0.58
PRKCSH-220ENST00000593104 NPY6RQ99463 290 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms